Streptomyces sp. CA-256286: JHY03_07800
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Entry
JHY03_07800 CDS
T11337
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHY03_07800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_07800
Enzymes [BR:
stcz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JHY03_07800
DNA repair and recombination proteins [BR:
stcz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHY03_07800
Prokaryotic type
JHY03_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTA30664
LinkDB
All DBs
Position
complement(920896..921579)
Genome browser
AA seq
227 aa
AA seq
DB search
MTDIDLLPESWRGVLGEELQKPYVKELADFVEEERAKGPVYPPREQVFAALDATPYDKVK
VLVLGQDPYHGEGQGHGLCFSVRPGVKTPPSLRNIYKEMQQELGLPVPDNGYLMPWAEQG
VLLLNAVLTVRGGEANSHKGKGWEKITDAVIRAVADRPDPAVFVLWGNYAQKKLPLIDEE
RHIVVKGAHPSPLSAKKFFGSRPFTQINEAVAAQGHQPIDWRIPHLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatatcgacctgctgcccgagtcctggcgcggcgtcctcggcgaagaactgcag
aagccgtacgtcaaggagctggcggacttcgtcgaggaggagcgggccaaggggccggtg
tatccgccgcgcgagcaggtcttcgccgccctggacgccacgccgtacgacaaggtcaag
gtcctcgtcctcggccaggacccgtatcacggcgagggacaggggcacgggctctgcttc
tccgtgcggcccggcgtgaagacaccgccctccctgcgcaacatctacaaggagatgcag
caggagctcggcctgccggtcccggacaacggctatctgatgccctgggccgaacagggc
gtgcttctgctgaacgcggtgctcaccgtgcgcggcggcgaggccaactcgcacaagggc
aagggctgggagaagatcaccgacgcggtgatccgcgccgtcgccgaccggcccgacccg
gccgtcttcgtgctctgggggaactacgcccagaagaagctccccctgatcgacgaggag
cgccacatcgtggtgaagggcgcccacccctccccgctctccgcgaagaagttcttcggc
tcccggcccttcacgcagatcaacgaggccgtcgcggcccagggccaccagccgatcgac
tggcggatcccccacctcggctga
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