Streptomyces sp. CA-256286: JHY03_10650
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Entry
JHY03_10650 CDS
T11337
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
stcz Streptomyces sp. CA-256286
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stcz03019
]
JHY03_10650
Enzymes [BR:
stcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JHY03_10650
Messenger RNA biogenesis [BR:
stcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JHY03_10650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
CTK3_C
Motif
Other DBs
NCBI-ProteinID:
QTA30938
LinkDB
All DBs
Position
complement(1227361..1230141)
Genome browser
AA seq
926 aa
AA seq
DB search
MATALGPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRK
CFYTTPIKALSNQKFADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQS
LSGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGD
TEVIVSEHRPVPLWQHVMAGRKMYDLFEEATDHGGRGAGRREVNPDLVRLARQENQNVYN
PRDRRRGKMVREADRERERRQRSRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAAVQ
QCLHAGLRLNDEDKRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGMLPT
FKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTG
RAGRRGIDVEGHAVVLWQRGMDPTALAGLAGTRTYPLRSSFRPSYNMAVNLVQQFGRHRS
RELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKEGMTCHLGDFEEYARLRRDLKDRET
ELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKFAGLALVLDPGLPAGRANGHRGFDHHD
GPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPRSPQSRRDLASALRTKSGHIV
PDRHRKQRAAAADDREISRLRTELRAHPCHGCDEREDHARWAERYHRLQRDTRQLENRIE
GRTNTIARTFDRIVALLTELDYLRGNEVTENGRRLARLYGELDLLASECLRDGVWEGLNP
AELAACVSALVYEARQADDAVAPKLPSGPAKLAMGEMVRIWGRLDALEEDFKINQTEGVG
QREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVRWCKQVIDVLGQVAAAAPREGSAG
ASSVARNARKAVDAVLRGVVAYSSVG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggccctcgggcccttccgggagatgtacgagttcggactggacccgttccag
atcgaggcctgccaggcccttgaggcgggcaagggggtgctggtcgcggccccgacgggg
tccggcaagacgatcgtcggcgagttcgccgtgcacctggccttggagcagggccgcaag
tgcttctacaccacgccgatcaaggcgctctccaaccagaagttcgccgacctggtcaag
cggtacggcgcggacaaggtcggcctgctgaccggcgacaacagcgtcaactccgaggcg
ccggtggtcgtgatgaccaccgaggtcctgcggaacatgctgtacgcgggctcccagtcg
ctgtccggcctcggctacgtggtcatggacgaggtgcactacctctccgaccgcttccgg
ggagcggtgtgggaggaagtgatcatccacctccccgagtcggtgaccctggtgtccctc
tcggccaccgtgtccaacgcggaggagttcggcgactggctggacaccgtgcgcggcgac
accgaggtgatcgtctccgagcaccggccggtgccgctctggcagcacgtcatggccgga
cgcaagatgtacgacctcttcgaggaggcgaccgaccacgggggccgcggcgccggacgc
cgtgaggtcaacccggacctggtccggctcgcccggcaggagaaccagaacgtctacaac
ccccgggaccgccgccggggcaagatggtgcgcgaggccgaccgcgagcgcgagcggcgc
cagcgcagccggatctggacgcccggccggcccgaggtcatcgaccggctggacaacgag
gggctgctgcccgcgatcacgttcatcttcagccgggccggctgcgaggccgccgtgcag
cagtgcctgcacgccggactccggctcaacgacgaggacaagcgccggctcgtgcgcgag
atcgtcgaggagcggaccgcctccatccccggcgaggaccttcatgtcctcgggtactac
gagtggctcgaaggcctggagcggggcatcgccgcgcaccacgcgggcatgctgccgacg
ttcaaggaggtcgtcgaggagctgttcgtacggggtctggtgaaggcggtcttcgcgacc
gagaccctggcgctcggcatcaacatgcccgcgcggtccgtggtgctggagaagctcgtc
aagtggaacggcgagcagcacgccgacatcacccccggcgagtacacgcagctcaccggc
cgggccgggcgccgcggcatcgacgtcgagggccacgcggtggtcctgtggcagcgcggc
atggacccgaccgcgctggccggcctcgcggggacgcgtacgtatccgctgcgctccagc
ttccgcccctcgtacaacatggccgtcaacctggtgcagcagttcgggcggcaccgctcg
cgggagctgctggagacctcgttcgcccagttccaggcggacaagtccgtcgtcgggatc
tcacggcaggtgcagcgcaacgaggagggcctggagggctacaaggagggcatgacctgc
cacctcggtgacttcgaggagtacgcgcggctgcgccgcgacctcaaggaccgggagacg
gagctcgccaagcagggcgcggcgcagcggcgggcggcggcggcctcctcgctggagaag
ctgaagccgggcgatgtcatccatgtgccgacggggaagttcgcggggctggcgctcgtg
ctggacccggggctgcccgccgggcgggccaacgggcaccgcgggttcgaccaccacgac
gggccccggccgctggtgctgaccgccgagcggcaggtcaagcggctggcctcgatggac
ttcccggtgccggtggaggcgctggaccggatgcgtgtcccgaagtcgttcaacccgcgc
tcgccgcagtcccggcgcgatctggcctccgcactgcggacgaagtccgggcacatcgtg
cccgaccggcaccgcaagcagcgggcggcggccgccgacgaccgtgagatcagccggctg
cggaccgagctgcgcgcccacccctgccacgggtgcgacgagcgcgaggaccatgcgcgg
tgggccgagcggtaccaccggctgcagcgggacacgcggcagctggagaaccggatcgag
gggcggacgaacacgatcgcccggaccttcgaccggatcgtcgcgctcctgaccgagctg
gactacctccggggcaacgaggtcacggagaacgggcgccggctggcccgcttgtacggg
gagctggatctgctcgccagcgagtgtctgcgggacggggtctgggaagggctcaacccc
gccgaactcgccgcgtgtgtctcggcgctggtctacgaggcgcggcaggccgacgacgcg
gtcgcacccaagctgccgtccgggcccgcgaagctcgccatgggcgagatggtgcggatc
tgggggcggctggacgcgctggaggaggacttcaagatcaaccagacggagggggtcggg
cagcgtgagcccgatctcggcttcgcctgggcggtctacatgtgggcctccgggcgcacg
ctggacgaggtgctgcgcgaggcggagatgccggcgggggacttcgtacggtggtgcaag
caggtgatcgacgtgctggggcaggtggctgcggcggctcctcgggaggggagtgcgggg
gcgagttccgtggctcggaatgctcggaaggccgttgatgcggtgcttcggggggttgtg
gcctacagctctgtcggctga
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