Streptomyces sp. CA-256286: JHY03_13050
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Entry
JHY03_13050 CDS
T11337
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03030
DNA replication
stcz03430
Mismatch repair
stcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHY03_13050
03430 Mismatch repair
JHY03_13050
03440 Homologous recombination
JHY03_13050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcz03032
]
JHY03_13050
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_13050
Enzymes [BR:
stcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHY03_13050
DNA replication proteins [BR:
stcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHY03_13050
DNA repair and recombination proteins [BR:
stcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHY03_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
QTA31174
LinkDB
All DBs
Position
1493924..1494931
Genome browser
AA seq
335 aa
AA seq
DB search
MLDDRQTAAPWPTAYPQGYAVVDVETTGLARDDRIISAAVYRLDALGNVEDHWYTLVNPE
RDPGPVWIHGLTSDVLEGAPLFPEVAAELSARLADRVLVAHNAAFDWSMIAREYARASVI
APVEQRLCTIALAKELRLPLPNHKLASLAAHFGVVQQNAHHALDDARVLAEAFRPSLHAA
ARGGVRLPLLECRPLTEWSDSSVTPRIGYQPARQPNSWRPSRKRPACPYPNPGRYEKERP
LKQGMRVAFSGDTSIDRELLEDRAVEAGLHVATSVSRLTSLLVTNDPDAATSKTQKARSF
GTPILEESAFTHLLRDVAPAEGAVLPHQASPPSSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaccgccagacagccgcaccatggccgaccgcctacccccaggggtacgcg
gtcgtcgacgtggagaccaccggcctcgcccgcgacgaccggataatctccgccgccgtc
taccggctcgacgccctgggcaatgtcgaggaccactggtacaccctggtgaacccggag
cgggaccccggacccgtctggatccacgggctgaccagcgatgtgctggaaggcgccccg
ctcttccccgaggtcgccgccgagctgtcggcacggctcgcggaccgggtgctcgtcgcg
cacaacgcggcgttcgactggtcgatgatcgcccgggagtacgcccgcgcctcggtgatc
gccccggtcgagcagcggctctgcacgatcgcgctcgccaaggagctgcggctgccgctg
cccaaccacaagctggcctcgctcgccgcccacttcggcgtcgtacagcagaacgcccac
cacgccctggacgacgcccgggtgctggccgaggcgttccggccgagcctgcacgcggcg
gcccggggcggggtgcggctgccgttgctggagtgccggccgctgaccgagtggtccgac
tcctccgtcaccccgcgcatcgggtatcagcccgcgcggcagccgaacagctggcggccc
tcgcgcaagcggccggcctgcccgtatcccaacccggggcggtacgagaaggagcggccg
ctcaagcaggggatgcgggtggcgttctccggggacacctcgatcgaccgggagctcctg
gaggaccgggcggtggaggcggggctgcatgtggcgaccagcgtgtcgcggctgaccagt
ctgctggtgaccaacgacccggacgcggcgacgtccaagacgcagaaggcgaggtcgttc
gggacgccgatcctggaggagagcgccttcacccatctgctgcgcgatgtggcgcccgcc
gagggggccgtgctgccgcaccaggcgtccccgccgtcatcggagtga
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