Streptomyces sp. CA-256286: JHY03_19580
Help
Entry
JHY03_19580 CDS
T11337
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JHY03_19580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcz03021
]
JHY03_19580
Transcription machinery [BR:
stcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JHY03_19580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LexA_DNA_bind
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QTA31819
LinkDB
All DBs
Position
complement(2220998..2222146)
Genome browser
AA seq
382 aa
AA seq
DB search
MQTRTVTTTTEHMSAIPVQNRAVHHPENDPENHRENHPGAAAGPPARAPEVVMSAAEAVM
EEAEHAPEPREARSRTDSGGPTSDLFRQYLREIGRIPLLNAADEVELARRVEAGLFAEER
LANTPDPDSRLAVDLDRLVVMGRTAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNL
GLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRM
LQERGYEPTAEEVAGQLDLTPERVTEVLRLAQEPVSLHAPVGEEDDVSFGDLIEDGDAAS
PVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLEDGRPRTLEEIGRIFGVTRERIRQI
ESKTLSRLRDHAFADQLRGYLD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccggaccgtgacgaccacgaccgagcacatgtcggcgattcccgtgcagaac
cgggccgtccaccacccggagaacgacccggagaaccaccgggagaaccacccgggagcc
gcggccggaccgcccgcgagggcgcccgaggtggtcatgagcgcagccgaggccgtcatg
gaggaagcggagcacgcccccgaaccccgcgaggcgcggagccggaccgacagcggcggc
cccacctccgacctcttccggcagtacctgcgcgagatcggccgcatcccgctgctcaac
gccgccgacgaggtcgagctggcccgccgcgtcgaggccgggctcttcgccgaggagcgc
ctcgccaacaccccggacccggactcccggctcgccgtcgacctggaccggctcgtcgtc
atgggccgcacggccaagcgccggctcatcgaggccaacctccgcctggtcgtctccgtc
gccaagcggtacgtgggccggggcctcaccatgctcgacctggtccaggaggggaacctc
ggattgatccgggcggtggagaagttcgactacgcccggggctacaagttctccacgtac
gccacctggtggatccgccaggccatgtcccgcgccctggcggaccaggcccgcaccatc
cgcgtccccgtccacgtcgtggagctgatcaaccgcgtggtccgcgtccagcgccgcatg
cttcaggagcgcgggtacgagccgaccgccgaagaggtcgcgggccagctcgacctgacc
ccggagcgggtcaccgaagtcctgcgcctggcccaggagccggtctccctgcacgccccc
gtgggcgaggaggacgacgtctccttcggcgacctcatcgaggacggcgacgccgcctca
cccgtggagtccgccgccttcctgctgctgcgcgagcacctggaagcggtgctctccacg
ctcggggagcgtgaacgcaaggtcgtgcagctgcggtacgggctggaggacgggcggccc
cgcaccctggaggagatcggccggatcttcggcgtgacacgcgaacgcatccgccagatc
gagtccaagaccctcagcaggctgcgggaccacgccttcgccgaccaactccgcggctac
ctcgactga
DBGET
integrated database retrieval system
