Streptomyces sp. CA-256286: JHY03_20820
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Entry
JHY03_20820 CDS
T11337
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03030
DNA replication
stcz03430
Mismatch repair
stcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHY03_20820 (holA)
03430 Mismatch repair
JHY03_20820 (holA)
03440 Homologous recombination
JHY03_20820 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcz03032
]
JHY03_20820 (holA)
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_20820 (holA)
Enzymes [BR:
stcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHY03_20820 (holA)
DNA replication proteins [BR:
stcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHY03_20820 (holA)
DNA repair and recombination proteins [BR:
stcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHY03_20820 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
Motif
Other DBs
NCBI-ProteinID:
QTA31943
LinkDB
All DBs
Position
complement(2345929..2346915)
Genome browser
AA seq
328 aa
AA seq
DB search
MATRKNSTDDPLAPLTLAVGQEDLLLDRAVQQVVAAARAADADTDVRDLASDQLQPGTLA
ELTSPSLFAERKVVIVRNAQDLAADTVKDVKAYLGAPAEEITLVLLHAGGAKGKALLDAA
RKAGAREVACPKTTKPAERLSFVRSEFRTHGRSATPEACQALVDSIGSDLRELASAVSQL
IADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVASALRAVAAADA
GVKGGGDDPEYALEKAVVAVARAARSGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggaagaattccaccgacgacccgctcgcccccctcaccctcgccgtgggc
caggaggacctcctcctggaccgtgcggtgcagcaggtggtggcggcggcccgcgccgcc
gacgccgatacggatgtccgtgatctggcgtccgaccagctgcagcccggcacgctcgcc
gagctcaccagcccctcgctcttcgccgagcgcaaggtcgtgatcgtgcgcaacgcgcag
gacctcgcggccgacacggtcaaggacgtcaaggcgtatctcggtgcgccggccgaggag
atcacgctcgtcctgctgcacgcgggcggcgccaagggcaaggcgctcctggacgcggcg
cgcaaggccggggcgcgggaggtcgcctgcccgaagaccaccaagccggccgagaggctc
tccttcgtacggtcggagttccggacccacgggcggtccgcgacgccggaggcgtgccag
gcgctggtcgactccatcggcagcgatctgcgggagctggccagtgcggtgtcccagctg
atcgcggatgtcgaggggacgatcgacgaggcggtcgtcgggcgctactacacggggcgg
gcggaggcgtcgtcgttcaccgtcgccgaccgggcggtcgaggggcgagcggcggaggcg
ctggaggcgctgcggtggtcgctgtccaccggggtcgcgcccgttctgatcaccagtgcg
ctggcgcagggggtgcgggcgatcgggaagctgtcctccgcgcggggtgggcggccggcc
gatctggcccgggagctcgggatgccgccgtggaagatcgaccgggtgcggcagcagatg
cgggggtggacgccggacggggtcgcctcggccctgcgggccgtggctgcggcggatgcg
ggggtgaagggcgggggggacgaccctgagtacgccctggagaaggccgttgtcgcggtg
gcgcgggctgcgaggtcggggcggtag
DBGET
integrated database retrieval system
