Streptomyces sp. CA-256286: JHY03_22390
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Entry
JHY03_22390 CDS
T11337
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JHY03_22390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_22390
Enzymes [BR:
stcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JHY03_22390
DNA repair and recombination proteins [BR:
stcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JHY03_22390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
PIF1
NAT10_TcmA_helicase
PhoH
NPHP3_N
Herpes_Helicase
AAA_16
UvrD_C
HTH_IclR
nSTAND3
DEAD
AAA
DUF87
TrwB_AAD_bind
AAA_28
ABC_tran
AAA_12
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QTA32094
LinkDB
All DBs
Position
complement(2536250..2538475)
Genome browser
AA seq
741 aa
AA seq
DB search
MSNMAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIENE
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADKIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCYLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPITAVYLVPFHRAELSLAG
QVRRLLRTGEDRMAAFQDVDWEKALAWLATRTGATLAPEQEEAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAE
GGPVPAVRLTRIFRQAQQSGVVTNAHRINAGQQPLTEGLSDFFLFVEDETEDAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAITPGRPDLPEKRFGGRVFRV
GDKITQIRNNYDKGENGVFNGTVGVVTSLDVDEQKLTVRTDEDEEIPYDFDELDELSHAY
AMTIHRSQGSEYPAVVIPVTNSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatggctgtactcgaaggggtcctggagaggatcacgtacgccaacgaggag
aacgggtacacggtcgcccgagtcgacaccgggcgcggagccggcgacctcctcacggtg
gtcggtgcgctgctcggcgcgcaggtcggtgagtcgctgcggatggagggccgttggggc
tcgcactcccagtacggcaagcagttcaccgtcgagaactacaccaccgtcctgcccgcc
accatccagggcatccgccgctatctcggttccgggctgatcaagggaatcgggccggtg
atggccgaccggatcaccacccacttcggcgtcgacaccctcgacatcatcgagaacgag
ccgaagcggctcgtggaggtccccggcctcggccccaagcgcacgaagatgatcgcggcc
gcatgggaggaacagaaggcgatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtccgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcgggttcctcaccgccgac
aagatcgcccaggcggtcggaatcccgcacgacagccccgaacgggtcaaggccggcctg
cagtacgccctctcccagtcctccgaccaggggcactgctacctccccgaggagcggctc
atcgcggacggggtgaagctcctccaggtcgacaccgggctcgtcatcgagtgcctggcc
gagctcgccgccgatccggaaggtgtcgtacgggagaaggtgccgtccccggagggcggt
gagccgatcaccgccgtctatctggtgccgttccaccgggccgagctctccctcgccggg
caggtgcggcggctgctgcggaccggggaggaccggatggcggccttccaggacgtggac
tgggagaaggcgctggcctggctcgcgacgcgtacgggggccacgctcgcgcccgagcag
gaggaggcggtacggctcgcgctcagccggaaggtggccgtcctgaccggcggacccggc
tgcgggaagtcgttcaccgtacggtccatcgtcgagctggcacgggccaagcgggcgaag
gtcgtgctggccgcgcccaccgggcgggccgccaagcggctggcggagctgacgggggcc
gaggcgtccaccgtgcaccggctcctcgaactgaagccgggaggggacgcggcgtacgac
cgtgaccgtccgctggacgcggacctcgtcgtcgtggacgaggcgtcgatgctcgatctg
ctcctcgccaacaagctcgtgaaggcggtggcacccggtgcccacctcctcctcgtgggc
gatgtcgaccagctgccctcggtcggggcgggcgaggtgctgagcgacctgctcgcggaa
gggggcccggtcccggccgtccggctcacccggatcttccgtcaggcccagcagtccggt
gtcgtgacgaacgcccaccggatcaacgccgggcagcagccgctcaccgaggggctgagc
gacttcttcctcttcgtggaggacgagaccgaggacgcgggcaagctcgccgtggatgtg
gcggcccgccgcatcccggccaagttcggcctcgacccccgccgtgacgtgcaggttctc
gccccgatgcaccgaggcccggcgggtgcggggaatctgaacgggctgctccagcaggcc
atcaccccgggccgccccgacctccccgagaagcggttcggcggccgcgtcttccgggtc
ggcgacaagatcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcacggtcggcgtcgtcacctccctggacgtggacgaacagaagctcaccgtccgcacc
gacgaggacgaggagatcccctacgacttcgacgagctggacgagctgtcccacgcctac
gccatgacgatccaccgctctcagggcagcgagtatccggccgtcgtcatccccgtcacc
aacagcgcctggatgatgctccagcgcaacctgctctacacggccgtgacacgcgccaag
aagctcgtcgtcctggtcgggtcccgtaaggcgatcggccaggccgtccgcacggtttcc
gcaggcagacgctgtacggcgctggatttccggctccggggcggctcgggagaagacttc
gcgtga
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