Streptomyces sp. CA-256286: JHY03_24000
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Entry
JHY03_24000 CDS
T11337
Name
(GenBank) type IV secretion protein Rhs
Organism
stcz Streptomyces sp. CA-256286
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GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Endonuclea_NS_2
WXG100_2
RHS
Endonuclease_NS
DUF7393
Motif
Other DBs
NCBI-ProteinID:
QTA32251
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Position
complement(2723980..2728701)
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AA seq
1573 aa
AA seq
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MGYTIPEGVDTMLDVVGVGWPNVDEDAYRDMADALREFADDADDDAQAAYRHVQRLISTG
QSESLTALDNHWSKVQGKHKDLGQAARLVAGALDRVADIIVARKIAAVGELADLCATVGI
TLAFAPVTAGLSALIAGAKIAATRIAFKRILKEMAEAAVGEIVATLTAPAVAAIENIVTD
LAIQTALNATGVQDGYNTEQTAQAGRDGLQLNSVSGGPSGPGDRAEIDHKAHKAAGLHLA
GVQIAMRDKTGSKLGKAKGHHGRAKGKDSLTAVLDKSIEEVTEKLGKALNDLGDHVGKKV
PEAITRSSKIHKGTDGDVRDSIRKINGRGKDGPASSGMKDKGTEDVRTRPNSVRDAANEP
RTHGVSLDKTVCKNDPVDIATGKMMLPQTDLALPGVLPLVLRRTHISTYRYGHWFGRSWA
STLDERIESGEGGAGVIWAREDGSLLIYPRLPAADGEHVMPLEGDRLPLFHGGVTDNDTS
YEIHDPHSGQVRVFTGNPYRTSSAYWLSAVEDRNGNRMSFWRRPDGAPTAVSHSGGYVVQ
ISADVSRVTGLAVRGPQEPAAVVAYGYDISGDLTVLTGPEGPDGPAMRFTYDDSGRVVSW
TDRNSTTFRYEYDSEGRVVRTVGPSGILSSHFSYQVAPDSGYRITRYTDSTGATTELVIN
DRLQLVAETDPLGHTTHLTWDPYDRPLTRTDPLGHTTELTWDRSGNLTEVRLPDGSVAFA
RYDERNLPLEVTAADGTVWRQTFDGRGNCTSTTAADGSLTRFTHDGTGAVATVVDTLGVT
TRIRSDRAGLPLEVTGPEGRVTRVERDHRGRPLVVTDPMGGRQQFVWDHDDRLETRVATD
GSRESWSWDAEGNCLQYTDAVGQVWATEYGPFDKPLVRTAPDGGRHELRYDTELRLLKVT
NPLGQDWHYDYDAAGRLTAETDFQGRNLAYSYDAANRLTTRTTPLGQVVTYTWDPMDRLV
LRDADGAMTRYAYDRAGALLEASTATSTLTMERDDLGRLLAETVDGRTIRYTYNEAGQRA
SRITPTGAISRLGYNEAGDRVSLTTDGNALNFTHDILGRELSRTWGPQGATGLTTAWDCL
GRPVSQALTASGSPDPLRTRDYDYRADGYPLSQGEGTPGSRRDKRITLDPMGRPLTVEAP
GWAESYTYDGAGNQTSAQWPEGAGHIEARGPRRYEGGVLTSAGTVHYEHDAAGRVVLRRR
SRLSRKPELWRYVYDVEDRLTSCTTPDGTRWTYDYDPLGRRTAKHRLAADGTTVAETVRF
TWDGPLLVEQYDETTGATLTWEYEGHRPLSQYERKPLGDGEVEARFFAIVTDLVGTPTEL
VSPDGRTAWRSRSTCWGTTGWHTSATAYTPLRFPGQYADPETGLHYNYFRHYDPDTARFT
STDPLGLTPAPNPSTYVVNPWVWTDPLGLAPKRCQLDAYDWDGSIRYGRLDHLGRPTGVN
ACLRPEIIDAKKGTEAGRLKPPGWRGNGTAFNEARGHLLADRLGGAGTGRQAWHNLVTQT
QTPTNSPDQRDQVEQVIFDQVTKNKEVVQYHIKPIYEGSNPIPIRLEYTAFGNKGFTFSH
SLENPAAGIRTGV
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
gtggggtacaccattcctgagggcgtcgacacgatgctcgacgtggtaggcgtgggctgg
ccgaatgttgacgaggacgcgtaccgcgatatggcggacgcactgcgggagttcgcggat
gacgcggacgatgatgcgcaggccgcataccggcatgtacagaggctgatctcgaccggg
cagagcgagtcgctcacggcgctggacaatcactggtccaaggtccagggcaaacacaag
gatctcgggcaggcggctcggctggtggccggtgcgctggatcgcgtggcggacatcata
gtcgcccgcaaaatagccgcagtcggtgaactggccgacctctgcgcgaccgtggggatc
acacttgcgttcgcaccggtgaccgcgggcctgtcggcgctgatcgccggggcgaagatc
gccgccacccgcatcgcgttcaagcggattctcaaggaaatggcggaggcggctgtcggt
gagatcgtcgcgacgctcaccgccccggcagttgctgcgatcgagaacatcgtgaccgac
ctggccatccagaccgcgctcaacgccacgggcgtccaggacggctacaacaccgaacag
acggcgcaggcgggccgggacgggctgcagctcaactcggtcagcggcggtccttcgggg
ccgggtgaccgtgcggagatcgaccacaaggcgcacaaggcggccgggctgcatctggcg
ggcgtgcagatcgccatgcgggacaagacgggcagcaagctggggaaggccaagggccat
cacggtcgcgccaagggcaaggactcgctgaccgctgtgttggacaagtccatcgaggag
gtgaccgagaagctcggcaaagcgctgaacgacctcggtgaccacgtcggcaagaaggtc
ccggaggcgatcacccgcagctcgaagatccacaagggtacggacggtgacgtccgcgac
agcatccggaagatcaatggccgcggcaaggacggcccggcgtcgtcgggaatgaaggac
aagggcaccgaggacgttcgcacccgtccgaactccgtacgcgacgcggcgaacgagccc
cggacgcacggtgtctccctggacaagacggtatgcaagaacgaccccgtggacatcgcc
accggcaagatgatgctgccccagacggacctggctctccccggcgtgctgcccttggtc
cttcgacgcacgcatatatcgacctaccgctacggtcactggttcgggcgcagttgggca
tccaccctcgacgagaggatcgagtccggcgagggtggtgccggggtcatctgggcccgc
gaggatggctcgctgctcatctacccccgcctgcccgcggcggacggcgagcacgtcatg
cccctggagggagaccggctgccgctgttccacggtggtgtgaccgacaacgacacgtcg
tacgagatacacgatccgcacagcggccaggtgcgcgtcttcacgggcaacccctaccgc
acctcctccgcctactggctgtcggcggtcgaggaccgcaacggcaaccgcatgtccttc
tggcgcaggcccgacggggctccgaccgccgtgtcccactcgggcggctacgtcgtgcag
atatcggccgacgtctcgcgggtcacgggccttgccgtccgcggtcctcaggaacctgcg
gcggtcgtggcctacggatacgacatctcgggcgacctgacggtcctgaccggtccagag
ggcccggacggaccggccatgcgattcacctatgacgacagcggccgtgtcgtgtcgtgg
accgaccgcaacagcaccacattccgttacgagtacgacagcgaggggcgcgtcgtacgc
accgtcggcccgagcgggatcctctccagccatttctcctaccaagtcgcccccgacagc
gggtaccgcatcacccgctacaccgactcgaccggtgccaccaccgagctggtcatcaac
gaccggctgcagttggtggccgagaccgacccgctcggccacaccacccacctcacctgg
gatccctacgatcgccccctgacccgaaccgacccgctcggccacaccacagaactcacc
tgggaccggtccggcaacctcacagaggtccggctgccggacggcagcgtggctttcgcc
cggtacgacgagcggaacctccccctggaggtgaccgccgccgacggcacggtgtggcgg
cagaccttcgacggacggggcaactgcacatccaccacggcggcggacgggtcgttgacc
cgcttcacccacgacggcaccggtgcggtggccactgtcgtcgacactctgggcgtcacc
acgcgcatccgttcggaccgcgcggggctgccgctggaggtcaccggccccgagggccgg
gtgacccgggtggaacgtgatcaccgcgggcgccccctggtggtcaccgatccgatgggc
ggtcgacagcagttcgtctgggaccacgacgaccggttggagacccgcgtcgccaccgac
ggctcccgtgagtcctggagttgggacgcggagggcaactgccttcagtacaccgacgcc
gttgggcaggtatgggccaccgaatacggacccttcgacaagccgctggtacggacggct
cccgacggtggacgtcacgaactgcgctacgacaccgagttgcgactgctcaaggtcacc
aaccccctggggcaggactggcactacgactacgacgcggctggccggctgacggcggag
acggacttccagggccggaacctcgcctactcctacgacgcggcgaaccggctcacgacg
cgcaccacacccctgggccaggtggtcacctacacctgggaccccatggaccgcttggtg
ctgcgggacgcggacggcgccatgacccggtacgcgtacgatcgcgcgggcgcactcctg
gaggccagcacggcgacctccaccctcacgatggagcgcgacgatctgggccggctcctc
gccgagacggtcgacggccgcaccatccggtacacctacaatgaggcaggacagcgcgcg
tcgcgcatcacacccacgggtgcgatcagccgcctcggttacaacgaggccggtgaccgg
gtttcactcaccacggacggcaacgccctcaacttcacccacgacattctcggccgcgaa
ctctcccgaacctgggggccgcagggtgccaccggcctgaccaccgcgtgggactgtctg
ggccggccggtcagccaggcattgaccgcgtccggatcaccggatccgctgcgtacgcgt
gactacgactaccgggccgacggctaccccctctcccagggcgaaggaacaccgggctcc
cgccgtgacaagcggatcacgctcgaccccatgggcaggccgctgaccgtcgaggcaccc
ggctgggctgagagctacacctacgacggcgccggcaaccagacgtcggcgcagtggccg
gagggcgccggacacatcgaggcccggggcccccgccggtacgagggcggagtcctgacg
tcggcgggcaccgtccactacgagcacgacgcggccggccgagtggtcctacgacgccgc
tcccggctctcgcgcaagccagagctgtggcggtacgtctatgacgtcgaggaccgcctc
acgtcctgcaccacgcctgacggcacccggtggacctacgactacgatccgctcggccga
cgcaccgcgaagcaccgcctggcggccgacggcaccacggtcgccgagaccgtccgtttc
acctgggacggcccacttctggtggagcagtacgacgagaccaccggcgcgaccctcaca
tgggagtacgagggccaccgcccgctgtcgcagtatgagcgtaagcctctgggagacggc
gaggtcgaggctcgcttcttcgccatcgtcaccgacctggtgggcacgcccaccgaactt
gtctctccggacggaaggacggcctggcgcagccgctccacctgctggggcaccactggt
tggcacacatcggctaccgcctacacacctctgcgattccccgggcagtacgccgacccg
gagaccggactgcactacaactacttccgccactacgaccccgacaccgcacggttcacc
agcacggacccactcggactcacccccgcgcccaacccctccacctacgtcgtcaatccc
tgggtctggacggatccactcggcctcgcgccgaagcgatgccaactggacgcctacgac
tgggacggatccatccgctacggccgcctggaccacctcgggcggccgaccggtgtgaac
gcgtgtctgcgtcccgagatcatcgacgccaagaaggggacggaggccggcaggctcaag
ccacccgggtggcggggcaacggcacggcgttcaacgaggcccgcggccatcttctcgcc
gaccgtctcggtggtgccggcacgggcagacaagcatggcacaacctggtcacacagacc
cagacccccacgaactcgccggaccagcgtgaccaggtcgagcaagttatcttcgaccag
gtgaccaagaacaaggaagtcgtgcagtaccacatcaagccgatctacgagggaagcaat
cccatcccgatccgcctggagtacacggcattcggcaacaaggggttcaccttctcgcac
agcctggaaaaccccgccgccggtatccggaccggcgtatag
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