Streptomyces sp. CA-256286: JHY03_26110
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Entry
JHY03_26110 CDS
T11337
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stcz Streptomyces sp. CA-256286
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcz03021
]
JHY03_26110
Transcription machinery [BR:
stcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JHY03_26110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
HTH_24
HTH_3
DUF7343
Sigma70_ECF
MarR
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
QTA32456
LinkDB
All DBs
Position
2973176..2974138
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AA seq
320 aa
AA seq
DB search
MSPRLDEARTPDASSACPQGPTNSDSPAASAVPGPRAGSAGTTPDSSGEGLEGLEGLPEI
PPYAEIGALDARALSKTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEP
MEDIVQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELR
LELAKAGDELSQQLDRAPTVAELSERLGITTDEVVEGMSASNAYTASSLDAKPEEDDSEG
ALADRLGYEDHGLEGIEYVESLKPLIASLPSRDRMILSLRFVSNMTQSEIGEELGISQMH
VSRLLSRTLVKLRKGLTLEE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaagcgcgtacccccgacgcgtcgtcggcatgtcctcaggga
ccgaccaattccgactcccccgccgcgagcgccgttccgggcccgcgcgccggctccgcc
ggcaccacccccgactcttccggcgaggggctcgagggccttgagggactccccgagatc
ccgccctacgccgaaatcggggctctggacgccagggccctgtcgaagacgctcttcgag
cgcctcgaatccctcgaagagggcacgcacgagtacgcgtacgtccgcaacaccctcgtc
gagctcaacctcgcgctcgtcaagttcgccgcctcccggttccgctcgcgcagtgagccg
atggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccggttcgag
ctgagccgcggtgtcgagttcccgacgttcgcgatgccgaccatcgtgggcgagatcaag
aggttcttccgcgacaccagctggtccgtgcgcgtcccgcgccgactccaggagctccgg
ctcgaactggccaaggcgggggacgagctctcccagcagctggaccgcgcgcccaccgtg
gcggagctgtcggagcgcctcggcatcacgacggacgaggtcgtcgagggcatgtccgcg
agcaacgcgtacaccgcgagctcgctggacgccaagcccgaggaggacgacagcgagggc
gccctcgcggaccgcctcggctacgaggaccacgggctcgaaggcatcgagtacgtcgag
tcgttgaagccgctgatcgcctcgctgccctcgcgggaccgcatgatcctctcgctccgc
ttcgtcagcaacatgacgcagtcggagatcggcgaggagctgggcatctcgcagatgcac
gtctcccggctgctctcccggacgctggtcaagctccgcaaggggctgaccctggaggag
tag
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