Streptomyces sp. CA-256286: JHY03_44040
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Entry
JHY03_44040 CDS
T11337
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz00250
Alanine, aspartate and glutamate metabolism
stcz00310
Lysine degradation
stcz00350
Tyrosine metabolism
stcz00650
Butanoate metabolism
stcz00760
Nicotinate and nicotinamide metabolism
stcz01100
Metabolic pathways
stcz01120
Microbial metabolism in diverse environments
Module
stcz_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JHY03_44040 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JHY03_44040 (gabD2)
00310 Lysine degradation
JHY03_44040 (gabD2)
00350 Tyrosine metabolism
JHY03_44040 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JHY03_44040 (gabD2)
Enzymes [BR:
stcz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JHY03_44040 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JHY03_44040 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JHY03_44040 (gabD2)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
QTA34207
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Position
4858454..4860070
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AA seq
538 aa
AA seq
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MTDSQAPDAPLGTNPVAVAPAGVRTAADVVTPEVVAQLIRGVVGSGRTANHSPFTGEKLA
DLPESTPEDVATAFDRARAAQPAWAATPVRQRAAILLRFHDLVLSRQSEVLDLIQLETGK
ARLHAHEEVQSVAVAARHYGRRAAAYLKPRRHTGVVPTLTKVTELRQPRGVVGQIAPWNY
PFELSVGDALPAFVSGNAVVMKPDTETALTALWARDLLIEAGLPAEVFQIVLGEGPVVGP
EVVGRADYVSFTGSTRTGREVAIGAASRLVGVSLELGGKNAMLVLKDADVEKAAAGAVRA
CFSSAGQLCISIERLYVHESIADDFVARFATRTRAMRLGNSLAYGADMGSLVGERQLETV
SRHVAEAVEKGATLVAGGVARPDIGPLFYEPTILDGVEAPMAVCTEETFGPVVSIYRFSD
EDEVIALANATPYGLNSSVWTTDSRRGHRVAARLRTGTVNINEGYAPAYGSVQSPMGGMK
DSGLGRRHGSEGILKYTEAQTVAQQRLIPLAPSFGMDDEKYAAFMTRSLKAMKAFRLR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcgcaggcccctgacgcccccctcggtacgaaccccgtcgcggtcgccccc
gccggcgtgcgcacggccgccgacgtggtcacccccgaggtggtcgcccagctgatccgc
ggtgtcgtcggatcgggccgtaccgccaaccactcgccgttcaccggggagaagctggcc
gacctgcccgagtcgacccccgaggacgtcgccaccgccttcgaccgggcccgcgccgcc
cagcccgcctgggccgccacccccgtccgtcagcgcgccgcgatcctgctgcgcttccac
gacctggtcctcagccgccagtccgaggtgctcgacctcatccagctggagaccgggaag
gcccggctgcacgcccacgaagaggtgcagtccgtcgccgtcgccgcccgccactacggg
cgccgggcggccgcctacctcaagccccggcgccacaccggtgtcgtcccgaccctcacc
aaggtcaccgaactgcgccagccgcgcggggtcgtcggccagatcgccccgtggaactac
cccttcgagctgtcggtgggcgacgccctgcccgccttcgtctccggcaacgccgtcgtg
atgaagcccgacacggagaccgcgctgaccgccctgtgggcccgtgacctgctcatcgag
gccggactgcccgccgaggtcttccagatcgtgctgggcgagggacccgtcgtcggcccc
gaggtcgtcggccgcgccgactacgtctccttcaccggctccacccgcaccggccgcgag
gtcgcgatcggcgccgcgtcccggctggtcggcgtatcgctggagctcggcggcaagaac
gccatgctcgtcctgaaggacgccgacgtcgagaaggccgccgcgggcgccgtccgcgcc
tgcttctcctccgccggacagctctgcatctccatcgagcggctgtacgtccacgagtcg
atcgccgacgacttcgtggcccggttcgccacccggaccagggccatgcggctcggcaac
tccctcgcgtacggagccgacatgggctccctcgtcggggagcgccagctggagacggtg
agtcggcatgtcgccgaggccgtcgagaagggcgcgacgctcgtcgcgggcggcgtcgca
cgccccgacatcgggccgctcttctacgagccgaccatcctggacggggtcgaggcgccg
atggccgtctgcaccgaggagaccttcggcccggtcgtctccatctaccgtttcagcgac
gaggacgaggtgatcgcgctggccaacgccaccccgtacggcctcaactccagcgtctgg
accaccgactcccggcgcggccaccgggtcgccgcccggctgcggaccggcaccgtcaac
atcaacgaggggtacgcccccgcctacggcagcgtccagtccccgatgggcggcatgaag
gactccggcctcggccggcggcacggctccgagggcatcctcaagtacaccgaggcccag
accgtcgcccagcagcggctgatcccgctggccccgtccttcggcatggacgacgagaag
tacgccgcgttcatgacccgcagcctcaaggcgatgaaggcgttccggctgcgctga
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