Streptomyces sp. CA-256286: JHY03_44190
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Entry
JHY03_44190 CDS
T11337
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03420
Nucleotide excision repair
stcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JHY03_44190 (pcrA)
03430 Mismatch repair
JHY03_44190 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_44190 (pcrA)
Enzymes [BR:
stcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHY03_44190 (pcrA)
DNA repair and recombination proteins [BR:
stcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHY03_44190 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JHY03_44190 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DNA_pol3_gamma3
DEAD
Motif
Other DBs
NCBI-ProteinID:
QTA34222
LinkDB
All DBs
Position
4877042..4879480
Genome browser
AA seq
812 aa
AA seq
DB search
MSSLFDDSFLAGLQSTEDGPPPPPEDHAPEAVPEGLFEGVYDAPPPPRDGYYRDGHPRPV
IDAAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLAERGVHPGQILAI
TFTNKAAGEMKERVEELVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAADSK
RLMALVCRDLDLDPKRYPPKSFTAKVSNLKNELIDEETFAGQAADGFEKTLAQAYALYQA
RLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGP
AGEADAPAELCVVGDADQSIYAFRGATIRNILQFEEDYSDAKTILLEQNYRSTQTILSAA
NAVIERNESRRPKNLWTNAGSGARIIGYVADTEHDEAQFVAEEIDRLTDKGDAKAGDVAV
FYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRILN
VPKRGIGDRAEAMIDALSMREKISFPQALRRVDEAYGMAARSSNAVKRFNTLMEELRTIV
ESGAGPAVVLEAVLERTGYLAELQASTDPQDETRVENLQELAAVALEFEQERAEAEGTGT
LAEFLEKVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRAL
GQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQPSYNPPSRFLEEIPEAHLEWKRK
GPMAAPAGPTSGITSSLSSSRARSGPSGFATRRSTEKPVVTLVVGDRVTHDQFGLGTVVA
VEGIGDQAKATVDFGDERPKKLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctggccggcctccagtccaccgaggacgggccg
ccgccgccccccgaggaccacgcacccgaagcggtgccggagggactcttcgagggcgtc
tacgacgcgcccccgccgccccgggacgggtactaccgggacggccacccgcgcccggtc
atcgacgccgcggcgctgctcgacgggctgaacaccgagcagcgcgccgccgtcgtgcac
gccgggtccccgctgctcatcgtcgccggggccggctcgggcaagacccgggtgctgacc
caccgcatcgcccacctgctggccgagcgcggggtgcacccggggcagatcctcgcgatc
accttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgaggagctcgtcggcccg
cgcgccaacgccatgtgggtcatgaccttccacagcgcgtgcgtccgcatcctgcgccgc
gagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgccgactccaag
cgcctgatggccctggtctgccgcgatctggacctggaccccaagcgctacccgccgaag
tcgttcaccgccaaggtctccaacctcaagaacgagctcatcgacgaggagaccttcgcc
ggtcaggcggccgacggcttcgagaagaccctggcccaggcgtacgcgctctaccaggca
cgcctgcgcgaggccaacgcgctggacttcgacgacatcatcatgacgacggtccacctc
ctccaggccttcccggacgtcgccgagcactaccgccgccgcttccgccacgtcctggtc
gacgagtaccaggacaccaaccacgcccagtacaccctggtacgtgagctggtcggcccg
gccggagaggccgacgcccccgccgagctgtgcgtcgtgggcgacgcggaccagtccatc
tacgccttccggggcgcgaccatccgcaacatcctccagttcgaggaggactactcggac
gcgaagacgatcctcctggagcagaactaccgctccacgcagacgatcctctccgccgcc
aacgcggtcatcgagcgcaacgagagccgccgccccaagaacctctggaccaacgccggt
tccggcgcccgcatcatcggttacgtcgcggacaccgagcacgacgaggcgcagttcgtc
gccgaggagatcgaccggctcaccgacaagggcgacgccaaggcgggcgatgtcgccgtc
ttctaccggaccaacgcccagtcccgtgtcttcgaagagatcttcatccgcgtcggactg
ccctacaaggtcgtcggcggcgtgcgcttctacgagcgcaaggaggtccgggacgtcctg
gcctacctccgagtcctcgccaaccccgaggacaccgtcccgctgcgccgcatcctcaac
gtgcccaagcgcggcatcggcgaccgcgccgaggccatgatcgacgccctgtcgatgcgc
gagaagatctccttcccgcaggcgctgcggcgcgtcgacgaggcgtacggcatggcggcc
cgctcgtccaacgccgtcaagcgcttcaacacgctgatggaggagctgcgcaccatcgtc
gagtccggcgccgggcccgccgtcgtactggaagccgtgctggagcggacggggtatctc
gccgagctccaggcctccaccgacccgcaggacgagacccgcgtcgagaacctccaggaa
ctcgccgccgtcgccctcgaattcgagcaggagcgcgccgaggctgagggcaccggcacg
ctcgcggagttcctggagaaggtcgcgctggtcgccgactccgaccagatccccgacgag
gacgaggacggctccggcgtcatcaccctgatgaccctgcacaccgccaagggcctggag
ttccccgtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgggccctc
ggccagaccaaggagctggaggaggagcggcgcctcgcgtacgtcggcatcacccgcgcc
cgcgagcggctctacctgacccgggccgcgatgcgcagcgcctggggccagccctcgtac
aacccgccctcgcggttcctggaggagatcccggaggcgcacctggagtggaagcgcaag
ggcccgatggccgccccggccggacccacctccggcatcacgtcctcgctctcctcctcc
cgcgcccgctccggaccctcgggcttcgcgacccggcgctccacggagaagcccgtggtc
acgctggtggtcggggaccgggtcacgcacgaccagttcgggctcggcacggtggtggcc
gtcgaggggatcggcgaccaggccaaggcgacggtcgacttcggcgacgagcgcccgaag
aagctgctcctgcggtacgcgccggtcgagaagctgtag
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