Streptomyces sp. CA-256286: JHY03_52510
Help
Entry
JHY03_52510 CDS
T11337
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
stcz Streptomyces sp. CA-256286
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcz03032
]
JHY03_52510 (ihfB)
03036 Chromosome and associated proteins [BR:
stcz03036
]
JHY03_52510 (ihfB)
03400 DNA repair and recombination proteins [BR:
stcz03400
]
JHY03_52510 (ihfB)
DNA replication proteins [BR:
stcz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JHY03_52510 (ihfB)
Chromosome and associated proteins [BR:
stcz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JHY03_52510 (ihfB)
DNA repair and recombination proteins [BR:
stcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JHY03_52510 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QTA35045
LinkDB
All DBs
Position
5859644..5860306
Genome browser
AA seq
220 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLTGGSSAARTTV
KAAAAKKSVAKKATAKKTTAKKAVAPAKKTTATAKKATAKKATATAKKATPAAKKATPAK
KATATAKKTAPAKKATAKKAPAKKTTARTTTAKKATARKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgccagcaggcc
gcagacgcggtcgacgcggtactcgacgcgatcgtccgtgccgttgtcgccggggaccgt
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgcgcg
ggtcaggggttcaaggacctggtgagcggctccaagaagctccccaagaacgatgtggcc
gtgaagaaggctcccaagggcagcctgacgggcggatcttccgccgcccgtacgacggtc
aaggccgccgccgccaagaagtcggtggccaagaaggccacggcgaagaagaccaccgcc
aagaaggccgtggcaccggcgaagaagaccaccgccaccgccaagaaggccaccgccaag
aaggcgaccgccacggcgaagaaggccacgccggccgcgaagaaggcgaccccggcgaag
aaggccaccgcgaccgccaagaagaccgcgcccgccaagaaggccacggcgaagaaggcg
cccgcgaagaagaccacggcgcgcaccaccacggccaagaaggccaccgcacgcaagaag
tga
DBGET
integrated database retrieval system
