Streptomyces sp. CA-256286: JHY03_52990
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Entry
JHY03_52990 CDS
T11337
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz02020
Two-component system
stcz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JHY03_52990
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JHY03_52990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcz03021
]
JHY03_52990
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stcz02035
]
JHY03_52990
Transcription machinery [BR:
stcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JHY03_52990
Bacterial motility proteins [BR:
stcz02035
]
Flagellar system
Flagellar assembly proteins
Stator
JHY03_52990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QTA35093
LinkDB
All DBs
Position
5909335..5910171
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPPVARGTVRPPAPSSLDELWRSYKTTGDERLREQLILHYSPLVKYVA
GRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIERAIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARNVERAYATLEAQLRRTPSEAEVASEMGIALEELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPDREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADAGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgcgcggcagtaccaccggttgcgcgtggcact
gtgcgccctcccgccccctcctcgctcgacgaactgtggcgttcgtacaagaccaccggc
gacgagcggctgcgggagcagctgatcctgcactactcgccgctcgtcaagtacgtcgcg
ggccgggtcagtgtggggctgccgtccaacgtcgagcaggcggacttcgtctcctccgga
gtcttcggactgatcgacgccatcgagaagttcgacatcgagcgggccatcaagttcgag
acgtacgcgatcaccaggatccgcggcgcgatgatcgacgaactgcgggcgctcgactgg
atcccccgttcggtgcggcagaaggcgcggaacgtggagcgcgcctacgccacgctggag
gcgcagctgcggcgcaccccctccgaggccgaggtcgcctcggagatgggcatcgccctg
gaggaactgcacgcggttttcagccagttgtcgctggccaacgtggtcgccctggaggag
ctgctgcacgtcggcggcgagggcggcgaccggctgagcctgatggacaccctggaggac
accgccgcagacaatccggtggaggtcgccgaggaccgcgagctgagacgtctgctcgcg
cgcgccatcaacacgctccccgaccgcgagaagaccgtggtgaccctctactactacgag
ggcctgaccctggcggagatcggcaacgtcctcggcgtgacggagagccgcgtgagccag
atccacaccaaatccgtgctccagctccgggccaaactggccgacgccggacgctga
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