Streptomyces sp. CA-256286: JHY03_53770
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Entry
JHY03_53770 CDS
T11337
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHY03_53770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stcz03019
]
JHY03_53770
03016 Transfer RNA biogenesis [BR:
stcz03016
]
JHY03_53770
Enzymes [BR:
stcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JHY03_53770
Messenger RNA biogenesis [BR:
stcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JHY03_53770
Transfer RNA biogenesis [BR:
stcz03016
]
Prokaryotic type
tRNA degradation factors
JHY03_53770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
CdsD_C
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QTA35171
LinkDB
All DBs
Position
6004402..6006615
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKEN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTILAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEIVAAGLDASKPFIKALC
KAQSDLASKAAKPVGEFPVFLDYQDDVFEALAKAVTSELTQALTIAGKQDREAELDRVKE
IAAEKLLPAFEGREKEISAAYRSLTKHLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDETKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgttatcgacaacggaaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagcggcccaaggagaac
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgcggccggcaagatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcg
gcctcctgctccaccatcctggcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgcgttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcaaggacggcgccgaggctccc
accgaggagatcgtcgccgccggtctggacgcctcgaagcccttcatcaaggcgctctgc
aaggcccagtccgacctcgcctccaaggccgccaagccggtcggcgagttcccggtcttc
ctggactaccaggacgacgtcttcgaggcgctcgccaaggccgtcacctccgagctgacg
caggcgctcaccatcgccggcaagcaggaccgcgaggccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggccttcgaaggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagcacctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcggcgtcacggacatccgtacgctggccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctcttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgtatggagcagcagctggacaccctttccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggagcgctcgcagagcgcgccatcgtgccggttctgccc
tcgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggtacgaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcgcgtctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgcccagcagggttcgcaggccgaggccgcccgcgccacgatcaac
gcgatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
acgaccaccttcggcgcgttcgtctcgctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
atccccgtcatcgagggtgaagaggacgagacgaaggacgacaccgacaagtga
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