Streptococcus pseudopneumoniae: SPPN_01305
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Entry
SPPN_01305 CDS
T01590
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
std
Streptococcus pseudopneumoniae
Pathway
std03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
std00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPPN_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
std03019
]
SPPN_01305
Messenger RNA biogenesis [BR:
std03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPPN_01305
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AEL09705
LinkDB
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Position
complement(207400..209079)
Genome browser
AA seq
559 aa
AA seq
DB search
MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIICTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
VNNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSQM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctgggagaa
atcgggaaaaatacatacggaattgaataccaagatgagattatcatcgtcgatgctggg
attaaattcccagaagatgacttgctgggtatcgactatgtcattcctgactactcatac
atcgtggacaatatcgaccgcgtcaaggctgttttaatcacacacggacacgaggaccac
attggtgggattccgttcctgctcaagcaagcaaatgtccctatctatgctggaccactt
gccttggctttgatccgtgggaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaataaaccacaacactgagttgacctttaaaaatctcaaggcaactttctttaga
acgactcactctattccagagcctttgggaattgtcattcatactccgcaaggaaaaatc
atctgtacgggcgacttcaagttcgactttactccagttggagaacctgcagacttgcat
cgtatggctgcccttggtgaagaaggcgtgctttgtcttctgtctgactcaacaaatgca
gaagtgccaacctttaccaactctgaaaaagtcgttggtcagtccatcatgaagattatc
caaggcattgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caagcaactgaagctgctgttaagactggacgtaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacggaatcgaccttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagactaccctgctggcgaggttctgatcctctgtacaggt
agtcagggcgagcctatggcagccctctctcgtatcgccaacggaacccaccgtcaggta
caactccaacccggtgataccgttatcttctcttcaagcccaatccctggaaatacgact
agcgtcaacaagctgattaacatcatttctgaagctggtgtcgaagttatccacggtaaa
gtgaacaatatccatacatctggacacggtggccagcaagagcaaaaactcatgctccgc
ttgattaagccaaaatacttcatgcctgtccacggtgaataccgcatgcaaaaagtccat
gctggactagcagtggatactggtgttgagaaggacaatatctttatcatgagtaatggt
gatgtgcttgcccttactgctgactcagctcgtattgcaggtcatttcaacgcccaagac
atctatgtcgatggaaatcgtatcggtgaaatcggcgcagctgtcctcaaagaccgtcgt
gatctatctgaagacggtgtcgttttagcagtcgcaactgttgacttcaagtcgcagatg
attctatctggtccagacatcctcagccgaggctttgtctacatgagagagtctggcgac
ctgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcactgaaaaacaag
gatgctagcgtgcaatctgtcaatggtgccattgtcaacgctattcgccccttcctctat
gaaaataccgaacgtgaaccgattatcatcccgatgatcctcacaccagatgaagaataa
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integrated database retrieval system