Streptococcus pseudopneumoniae: SPPN_02110
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Entry
SPPN_02110 CDS
T01590
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
std
Streptococcus pseudopneumoniae
Pathway
std03030
DNA replication
std03430
Mismatch repair
std03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
std00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPPN_02110 (polC)
03430 Mismatch repair
SPPN_02110 (polC)
03440 Homologous recombination
SPPN_02110 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
std03032
]
SPPN_02110 (polC)
03400 DNA repair and recombination proteins [BR:
std03400
]
SPPN_02110 (polC)
Enzymes [BR:
std01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPPN_02110 (polC)
DNA replication proteins [BR:
std03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPPN_02110 (polC)
DNA repair and recombination proteins [BR:
std03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPPN_02110 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
HHH_3
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEL09866
LinkDB
All DBs
Position
355543..359934
Genome browser
AA seq
1463 aa
AA seq
DB search
MSNSFEILMNQLGIPTEMRQAPALAQADIERVVVHKISKVWEFHFIFSNILPIEIFLELK
KGLSEEFSKTGNKAVFEIKALSQEFSNQLLQAYYREAFSEEPCASQGFKSLYQNLQVRAE
GNQLFIEGSEAIDKEYFKKNHLPNLAKQLEKFGFPTFNCQVEKNDVLTQEQEEAFHAKNE
QIVQVANEEALRAMEQLEQMAPPPAEEKPVFDFQAKKAAAKPKLDKAEITPMIEVTTEEN
RLVFEGVVFDVEQKVTRTGRVLINFKMTDYTSSFSMQKWVKNEEEAQKFDLIKKNSWLRV
RGNVEMNNFTRDLTMNVQDVQEVVHYERKDLMPEGERRVEFHAHTNMSTMDALPEVEEIV
ATAAKWGHKAVAITDHGNVQSFPHGYKAAKKAGIQLIYGMEANIVEDRVPIVYNEVEMDL
SEATYVVFDVETTGLSAIYNDLIQVAASKMYKGNVIAEFDEFINPGHPLSAFTTELTGIT
DDHVKNAKPLEQVLQEFQEFCKDTVLVAHNATFDVGFMNANYERHGLPRISQPVIDTLEF
ARNLYPEYKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFIKEVAEKHGVTDLARL
NIDLISPDSYKKARIKHATIYVKNQIGLKNIFKLVSLSNTKYFEGVPRIPRTVLDAHREG
LILGSACSEGEVFDAVVSQGVDAAVEVAKYYDFIEVMPPAIYAPLIAKEQVKDMEELQTI
IKSLIEVGDRLGKPVLATGNVHYIEPEEEIYREIIVRSLGQGAMINRTIGHGEHAQSAPL
PKAHFRTTNEMLDEFAFLGEELARKLVIENPNALAEIFEPVEVVKGDLYTPFIDKAEETV
AELTYKKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVQRSNERGYLVGSR
GSVGSSFVATMIGITEVNPLSPHYVCGQCQYSEFITDGSYGSGFDMPNKDCPKCGNKLSK
NGQDIPFETFLGFDGDKVPDIDLNFSGEDQPSAHLDVRDIFGEEYAFRAGTVGTVAAKTA
YGFVKGYERDYGKFYRDAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPA
DDVTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPNEIPMDDEGVMALF
SGTDVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWLG
NAQDLIKQGIADLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERNGY
IEAMKANKVPEWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRAK
AFDIKTMGAGLDAIKRRMEEISEKRKNNEASNVEIDLYTTLEIVNEMWERGFKFGKLDLY
RSQATEFLIDGDTLIPPFVAMDGLGENVAKQLVRAREEGEFLSKTELRKRGGLSSTLVEK
MDEMGILGNMPEDNQLSLFDELF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagttttgaaattttaatgaatcaattggggatacctactgaaatgagacag
gctcctgctttagcacaggccgatattgagcgagttgtggttcataaaattagtaaggta
tgggagtttcatttcatattttctaatattttaccgattgaaatctttttagaattaaag
aaaggtttgagcgaagaattttctaagacaggcaataaagctgttttcgagatcaaggct
ctctctcaagaattttcaaaccaacttttacaagcctattatagagaggctttttctgag
gagccatgtgctagtcaaggatttaaatctctttatcaaaatctgcaagttcgtgctgaa
ggcaatcaactatttattgagggctctgaggctattgataaggaatattttaagaagaat
catcttcctaatttagctaaacaacttgaaaagtttggttttccaacttttaattgtcaa
gtcgagaagaatgatgtgctgacccaagagcaggaagaggcctttcatgctaaaaatgag
cagattgttcaagtggccaatgaggaagcgctccgtgctatggaacaactggaacagatg
gcacctcctccagcggaagagaaaccagtctttgattttcaggccaaaaaagctgcagct
aaacccaagctagataaggcggagattactcctatgatcgaagtgacgacggaggaaaat
cgtctggtctttgaaggggttgtttttgatgtggagcaaaaagtgaccagaacagggcgt
gttttgatcaactttaaaatgacggactacacttcaagtttttctatgcaaaagtgggtc
aagaatgaggaagaggcccagaagtttgatctcattaagaaaaattcttggcttagagtt
cgtgggaatgtggagatgaataatttcacacgcgatttgactatgaacgtgcaggatgtg
caggaagttgttcactatgagcggaaggatttgatgccagaaggtgagcgtcgggttgag
tttcatgctcatactaacatgtcgactatggatgctttgccagaggtagaagaaatcgtt
gcgacagctgctaagtggggacacaaggcggttgccatcacggatcatggaaatgtccag
tccttcccacatggctataaggcggctaagaaagcgggaatccagctgatctatggtatg
gaagccaatatcgttgaggaccgtgtccctatcgtctacaacgaagtggagatggattta
tcagaagcaacctatgtggtctttgacgtggaaacgacgggtctatcagccatctacaat
gacttgattcaggttgcggcttctaagatgtacaaggggaatgtcattgctgaatttgat
gaatttatcaatcctgggcatcctttgtcagcttttactactgagttgactggaattaca
gatgaccatgtcaaaaatgccaaaccactagaacaagttttgcaagaattccaagaattc
tgcaaggatacggtcctagttgcccacaatgcgacctttgacgttggatttatgaatgcc
aactatgagcgtcatggtcttccaaggattagtcagccagttattgatacgctggagttt
gctagaaacctctatcctgagtataaacgtcatggtttgggacctttgaccaagcgtttt
ggtgtggccttagaacatcaccacatggccaactacgatgcggaagctacaggtcgcctg
cttttcatctttatcaaagaggtggcagaaaaacatggtgtgaccgatctagctagactc
aacattgatttgattagtccagattcttacaaaaaagctcgaatcaagcatgcgactatt
tatgtcaagaatcagataggtctaaaaaatatctttaaactggtttctctgtctaatacc
aagtactttgaaggggtgccacgaattccgagaacagttctagatgcccatcgagaaggt
ttgattttaggctcagcttgctctgaaggtgaagtttttgatgcagtcgtttcccaaggt
gtggatgcggcggttgaggtggccaagtattatgactttatcgaggttatgccaccagct
atctatgcgccattgattgctaaggagcaggtcaaggatatggaggaactccagaccatt
atcaagagtttgatagaagttggagaccgtcttggtaagcccgttctagctacgggaaat
gtccattatatcgaaccggaagaagagatttaccgtgaaattatcgtccgtagcttggga
cagggggctatgattaaccgaactatcgggcatggagaacatgcccaatcagcaccactt
ccaaaggctcattttagaacgacaaatgaaatgttggatgaatttgccttcttgggagag
gaattagctcgtaaactggttattgaaaatcccaatgccttggcagaaatctttgaacct
gttgaagttgttaagggggatttgtacacgcctttcatcgacaaggcggaagaaacggtc
gctgaattgacctataagaaagcttttgagatttatggaaatccgctgccagatattgtc
gatttgcggattgaaaaagaactgacttccattctggggaatggatttgctgtgatttat
ctggcttcccagatgctggtacaacgttctaatgaacggggttacttggttggttctcgt
gggtctgtcggatctagttttgttgcgactatgattgggattacagaggtcaatcctctc
tctcctcactatgtctgtggtcagtgtcagtacagtgagtttatcaccgatggttcgtac
ggttcaggatttgatatgcccaataaggactgtccaaaatgtggtaacaaactcagcaaa
aatgggcaagatattcctttcgagaccttccttggttttgatggggacaaggttcccgat
attgacttgaacttctcgggagaagatcaacctagcgcccacttggatgtacgcgatatt
tttggtgaggaatatgccttccgtgcaggaacggttggtacggtggctgccaagactgcc
tatggttttgtcaagggttacgagcgggactatggcaagttttatcgtgatgcagaggta
gaacgcctcgctcaaggtgctgctggtgtcaagcggacaacaggacaacacccgggggga
atcgttgttattccgaactacatggatgtctatgatttcacgcctgttcagtatccagcg
gatgacgtgacggctgaatggcagacgactcactttaacttccacgatattgatgagaac
gtccttaaacttgatgtactgggacatgatgatccgaccatgattcgaaaactccaggac
ttgtctgggatcgatcctaatgaaatccctatggatgatgaaggcgtgatggccctcttt
tcagggacagatgtgctaggggtaactcctgaacaaatcggaacaccgacgggtatgctg
ggaattccagagtttggaaccaactttgtacgtgggatggtagatgagacgcatccgacg
acttttgcagagctgcttcagctctcaggtctgtcccatggtaccgatgtgtggttggga
aatgctcaggatctgattaagcaaggaattgcggacctatcaaccgttatcggttgtcgg
gacgacatcatggtttacctcatgcatgccggtctcgaacctaagatggcctttaccatt
atggaacgggtacgtaagggcttgtggctcaagatttccgaagaggagcgaaatggctac
attgaagccatgaaggccaataaggtgccagagtggtatatcgagtcctgtgggaaaatt
aagtacatgttccctaaagcccatgcggcagcctacgttatgatggccttgcgtgtagct
tacttcaaggttcatcatcccatttattattactgtgcttacttctcaatccgtgctaaa
gcctttgatattaagactatgggtgcgggcttggatgccatcaaacgcagaatggaagaa
atctctgaaaaacggaagaacaatgaggcctctaatgtggagattgacctctatacaact
cttgagattgtcaatgaaatgtgggaacgtggtttcaagtttggcaaactcgatctctat
cgtagtcaggcgacagagttccttatcgatggggataccctcattccgccatttgtagca
atggatggtctgggagagaacgttgctaagcagttggtgcgagcgcgtgaagagggagaa
ttcctctctaaaacagaactacgcaagcgtggagggctctcatcaaccttggttgaaaag
atggatgagatggggattctcggcaatatgccagaggataaccagttgagtttgtttgat
gagttgttttaa
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integrated database retrieval system
