Streptococcus pseudopneumoniae: SPPN_03225
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Entry
SPPN_03225 CDS
T01590
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
std
Streptococcus pseudopneumoniae
Pathway
std03410
Base excision repair
std03430
Mismatch repair
std03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
std00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPPN_03225
03430 Mismatch repair
SPPN_03225
03440 Homologous recombination
SPPN_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
std03400
]
SPPN_03225
DNA repair and recombination proteins [BR:
std03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SPPN_03225
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPPN_03225
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPPN_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
YjeF_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AEL10085
LinkDB
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Position
595740..597962
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AA seq
740 aa
AA seq
DB search
MITPTYEWQFAPQVEDADFTKIAKKAGLGPEVARLLFERGIQDQESLKKFLEPSLEDLHD
PYLLHDMDKAVERIRQAIEEGENILIYGDYDADGMTSASIVKESLEQLGAECRVYLPNRF
TDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIELAQSMGVDVIVTDHHSMPETLPD
AYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTVADMVSLTDENR
ILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDL
LTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVNPEKKVQVLAKEGWNPGVLGIV
AGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAGMTLE
VEKLSDLSQILEDYVREKGADAGGKNKLNLDEELDLETLSLETVKSFERLAPFGMDNQKP
VFYIKDFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELAVKLS
VNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFDEELPDIATSEAVVVKT
IPEDITLLKTIFQEQNFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDIRYKL
KDLATYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQTVKD
QEMMALGTVQEIYDFLMEKE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgataacacctacttatgaatggcagtttgccccgcaggttgaagatgcggattttaca
aagatagccaagaaggctggactgggtcctgaggtagctcggttattatttgaaagaggg
attcaggaccaagaaagtctgaagaagtttttagaaccctccttggaggacttgcacgac
ccttatctgctccatgatatggacaaggcagtggaacggattcgtcaggccattgaagaa
ggggaaaatattctcatctatggagattacgatgcggatggtatgacttcggcttcgatt
gtgaaggaaagtttggaacaacttggtgccgagtgccgtgtttacttgcctaatcgtttt
actgatggctatggtccaaatgccagtgtttataaatactttatcgagcaagaaggaatt
tctttgattgtgacggtggataatggggttgctggtcacgaggctattgaattggcccag
tctatgggagtagatgtcattgtgaccgaccatcattctatgcctgaaaccctgcctgat
gcctatgctattgtccatcctgaacatccagatgcggattatcctttcaaatatttggct
ggttgtggagtggctttcaagctggcgtgtgcccttttagaagaagtacaagtggaattg
cttgatttggtcgctattggtaccgttgcagatatggttagtttgacagatgagaaccgt
atcttggttcaatacggtctggaaatgttgggacatactcagcgtattggtctacaagaa
atgctggacatggctgggattgctgccaacgaagtgacagaagaaacggttggtttccag
attgcccctcgtttgaatgccttgggtcgtttggatgatcctaatccagccattgatttg
ctgactggatttgacgacgaggaagctcacgagattgccctcatgattcatcagaaaaac
gaagagcgcaaggaaatcgtccagtctatctatgaagaagctaagaccatggtgaaccct
gagaagaaggtccaagtcttggccaaggaaggttggaatcctggagttctagggatcgtg
gctggtcgtttgttggaagaactagggcagacagtcatcgttctcaatatagaggatggt
cgtgccaagggcagtgctcgtagtgtggaagcggtcgacatttttgaagctctggatcct
catcgagacctctttatcgcctttggtggccatgctggtgcggctggcatgacgctggaa
gttgagaaactctcggatttatctcagattttagaagactatgtccgtgaaaaaggtgca
gatgctggtggcaagaacaagttaaacctagatgaagagctggatttggagacacttagc
ttggaaacggtcaaaagttttgaacgtttggcaccttttggcatggacaatcagaaacct
gtcttttatataaaggattttcaggtcgaaagtgcccgtactatgggggcaggcaatgct
catctcaagttgaaaatttccaagggtgaggcgagttttgaagtggtagcctttggccaa
ggcagatgggcgacagagttttctcaaaccaagaatctagagttggcagtcaaattgtct
gtcaaccaatggaatggccaaactgccctccagttgatgatggtggatgcgcgtgtggag
ggtgttcaactttttaacattcgtgggaaaaatgcagtcttgccagaaggggttccagtc
ttggattttgatgaagaactgccagatatagcgactagtgaagctgtggttgtaaaaacc
attcctgaggatattaccttgttgaagaccatttttcaggagcagaatttttctgctgtt
tatttcaaaaatgacattgacaaggcctactatttgacaggctatgggactagagatcag
tttgccaaattgtacaagaccatctaccagttcccagagtttgatattcgctacaagctg
aaagatttggctacttatcttaatatccaacaaatcttgctggtcaagatgattcaagta
tttgaagagctaggctttgtgacgatcaaagatggggtcatgacagtcaataaagaggca
ccaaagcgggagatcggagaaagtcagatttatcaaaatctcaaacaaaccgtcaaagac
caagaaatgatggcgctgggtactgtgcaagaaatttatgactttttgatggaaaaagag
tag
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