Streptococcus pseudopneumoniae: SPPN_07770
Help
Entry
SPPN_07770 CDS
T01590
Name
(GenBank) cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
std
Streptococcus pseudopneumoniae
Pathway
std03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
std00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPPN_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
std03019
]
SPPN_07770
03009 Ribosome biogenesis [BR:
std03009
]
SPPN_07770
Enzymes [BR:
std01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPPN_07770
Messenger RNA biogenesis [BR:
std03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SPPN_07770
Ribosome biogenesis [BR:
std03009
]
Prokaryotic type
rRNA helicases
SPPN_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEL10980
LinkDB
All DBs
Position
complement(1486362..1487936)
Genome browser
AA seq
524 aa
AA seq
DB search
MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLVLEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKEPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVEQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLQIIENLTKK
RMKGLKPASAEEAFQAKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRRGDDRRDNRRGDNRRGGRRD
DFKKGSRGNDRFDKEKRYRKDNKKPRTTSSEKQTGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaatgaattaaacttgtctgctgatttgctagcagagattgaaaaagctggt
tttgtagaagccagtccgatccaagaacaaaccattcctttggtccttgaaggcaaggac
gttatcggtcaagctcagactggtacaggaaaaactgcagcttttggcttgcctactctt
gaaaaaatccgtacagaagaagcgaccatccaagccttggtcatcgctccaactcgtgaa
ctcgctgtccaaagtcaagaagaactattccgctttggtcgtagtaagggagtcaaagtt
cgctcagtatatggcggatcaagcattgaaaaacaaattaaggctcttaaatctggtgcc
catatcgtggtgggaacacctggtcgtctcttggacttgattaaacgcaaggccttgaaa
ttacaagatattgaaactctcatccttgacgaagcagatgaaatgctcaacatgggcttc
cttgaagatatcgaagccatcatttctcgtgttcctgaaaaccgtcaaaccttacttttc
tcagcaactatgccagatgctatcaaacgtatcggtgttcagtttatgaaagaacctgag
catgtgaagattgcggctaaggaattgacaacagaattggttgaccagtactatatccga
gttaaggaacaagaaaaatttgataccatgactcgtcttatggatgtggaacaaccagaa
cttgctatcgtatttggtcgtactaaacgccgtgtagatgaattgactcgtggtcttaaa
atccgtggtttccgtgccgaaggaattcatggtgacctggaccaaaacaaacgtctgcgt
gtccttcgtgactttaaaaatggcaatcttgatgttttggttgcgacagacgttgctgcg
cgtggtttggatatttcaggtgtgactcatgtctataactacgatattccacaagatcct
gaaagttatgttcaccgtattggtcgtacaggtcgtgctggtaagtcaggtcagtctatt
actttcgtatcaccaaatgaaatgggttacctccaaatcattgaaaacttgactaagaaa
cgcatgaaaggtctcaaacctgcaagtgcagaagaagccttccaagctaaaaagcaagta
gctcttaagaaaatcgaacgtgattttgcagatgaaaccattcgtgccaactttgagaaa
tttggcaaggatgctcgtaaactagctgccgaatttactccagaagaattggcaatgtat
attttgagtctgactgttcaagacccagatagccttccagaagtggagattgcgcgtgaa
aaaccactgccatttaaaccatccggtaatggcttcggtggtaaagctaagggaggtcgt
cgtggagatgaccgtcgtgataatcgccgtggagacaaccgtcgtggtggccgccgtgat
gatttcaaaaaaggaagtcgtggcaacgatcgttttgataaggaaaaacgttaccgtaag
gataataaaaaaccacgcactacttcaagcgaaaagcaaacaggctttgttattcgtaac
aagggcgataaatag
DBGET
integrated database retrieval system
