Streptococcus thermophilus LMD-9: STER_0095
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Entry
STER_0095 CDS
T00414
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03030
DNA replication
ste03430
Mismatch repair
ste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STER_0095
03430 Mismatch repair
STER_0095
03440 Homologous recombination
STER_0095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ste03032
]
STER_0095
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_0095
Enzymes [BR:
ste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STER_0095
DNA replication proteins [BR:
ste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STER_0095
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STER_0095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
B
YhfH
Motif
Other DBs
NCBI-ProteinID:
ABJ65449
UniProt:
Q03MX3
LinkDB
All DBs
Position
72798..77192
Genome browser
AA seq
1464 aa
AA seq
DB search
MSDKFKLLLKQIHFPQHEEAYNEIKSGSIESVKLFKSKRQWFFVFSFRNLLSYETFTLFD
NLLHSSFDSLGAKVSYMINVEDISCDQSLLEAYFSYALDILKSSHFSIYSLFSNLGIEIS
NNSISVKAPAHILRENLHERFIALIADVLSNVGLSNVSISVLEDKEASSSLEEAYETNKI
SLQEEAESQARQALQSIVQSSPVPPPQKHQAQNFAEKQSQRVASFDKAEITPMIEVNSEE
NRIVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSEELVKFGMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAIPTVEEL
IDTAAFWGHPAVAITDHANVQSFPHGYHKAKKAGIKAIFGLEANLVEDKVPIVYNSENLE
LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIVEQFDEFIDPGYPLSAFTTELTGI
TDNHVKGAKPLVQVLQEFQEFCKGAVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE
FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFEKHGLTNLEQ
LNTELVSDDSYKKSRVKHATLYVQNQTGLKNLFKLVSLSNVSYFEGVARIPRKVLDEYRE
GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEGAIEQ
LIKDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKGENAQPAP
LPEAHFRTTNEMLDEFAFLGKDLAYEIVVANTQAMANQIEEVEVVKKDLYTPYIDRAEEQ
VAEMTYAKAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPKCQHSEFITDGSYGSGFDLPDKECSECGTEYK
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYNKFYRDAEVDRLAMGVAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL
FSGTEVLGVTPEQIGTSTGVLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNG
YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA
KAFELKTMSAGLDAVKARMEDIKEKRQRNEATNLENDLFTTLEIVNEMLERGFTFGQLDL
YKSQATEFLIEGDTLIPPFIALEGLGENVAKQLVAAREEGEFLSKTELRKRGGLSSTLVE
RLDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaatttaagcttcttttaaaacaaattcattttccacagcatgaggaagct
tataatgaaattaaaagtggttctattgaatcagtaaagctatttaaatcaaaacgtcag
tggttttttgttttttctttcagaaatctactgtcatatgagactttcactctttttgat
aatctgcttcattcttcttttgattctttaggggctaaagtttcatatatgattaatgta
gaagatatttcttgtgatcaatctttacttgaagcttatttttcatatgctttagatatt
ttaaaatcatcacacttttcaatctattccctattctccaatttggggattgagatttct
aataatagtatttctgttaaggctcctgcgcatatccttagagagaatttacatgagaga
tttatagccctgattgctgatgttctttcgaatgttggtttatctaatgtttctatttcg
gttcttgaggataaagaagcttcatcctctcttgaagaggcttacgagacaaataagatc
tccttacaagaagaggcagaatctcaagctagacaagcacttcaatcaattgttcaaagt
tcgccggtaccaccacctcagaagcatcaggcccaaaattttgctgagaaacaaagtcaa
cgagttgcaagctttgataaggctgagattactccaatgattgaagtcaattctgaagaa
aataggattgtttttgaaggatatatttttgatgtagagcaacgtgaaacgaaaacaggt
aggattataataaattttaaggtaactgattatacctctagttttgctatgcaacgttgg
gtgaaggatagcgaagaacttgttaagttcggtatgattaaaaaaggaaactgggtaaga
gttcgaggtcgtattgagaataatccttttacacatagtttgactatgaacgtacaagat
attaaggaaatttctcatactcctcgtaaggatttgatgcccgagggacagaagcgagtt
gaatttcatgctcatactaacatgtcaactatggatgctataccaacagttgaagagctc
atcgatacagcggctttttggggacatccagcagttgcgataacagatcatgcaaatgtt
caaagttttcctcatggctaccataaagctaagaaagctggaattaaggcgatttttggt
cttgaagccaatcttgttgaggacaaagttcctattgtttataattccgaaaatttggaa
ttaaaagaagcaacttatgttgtattcgacgtagaaacaacaggtttgtctgctgttcat
aatgatttgatccagattgcggcatcaaaaatgcataaaggtaatattgttgagcaattt
gatgaattcattgatcctggatatccgctttctgcgtttacgactgaattgactggtatt
actgataatcatgttaaaggtgccaaacctttagtgcaagttttacaggagtttcaagaa
ttctgtaaaggagctgtgctagtcgcccacaatgcgacctttgacgttgggtttatgaat
gccaattatgaaagacatcagttaccgacaatctcacaaccggttattgatactttagaa
tttgcacggaatctttatcctgagtataaacgtcatggtttgggtcctttgacaaagcgt
tttggcgttgccttggaccaccaccacatggccaactatgatgcggaagcaacaggtcgt
ttgttgtttattttcattaaagatgtattcgaaaagcatggattgactaatctggaacag
ttgaacacagaattggtctctgatgattcgtataagaagtctcgtgtcaaacatgcgaca
ctatatgttcagaatcaaacgggtttgaagaatctctttaaattggtaagcctatcaaat
gtatcatattttgagggagtagcccgtattcctcgtaaggttttagatgagtatcgtgag
ggaatcatagtcggttccgcatgtgcagatggtgaagtttttgatactctcttgtctcat
ggtattgataaggcagttgaagttgctaaatactatgattttattgaagttatgccacca
gcgatttatgcgccattgattgcaaaggatttaatcaaggatgagggagctatagaacaa
cttattaaagatttgattgaagttgctaatcgtcttgacaagcctgtgcttgctacggga
aatgtacattatatcaatcctgaagatgccatttatcgtgaaatcattgttcgtgctttg
ggacaaggagctatgatcaatagaccaattggtaagggggaaaacgctcaacctgctcct
ctaccggaagctcattttagaacaaccaatgagatgctagacgaatttgcctttttgggg
aaagacttagcctatgaaattgttgtagctaatacacaagctatggcaaatcaaatcgaa
gaggttgaagtcgtcaaaaaagacttgtatacaccttatattgatcgtgcagaagaacag
gttgcagagatgacttatgctaaagcatttgagctttatggtaatcctttgcctgatatt
attgacttgcggattgagaaagagttgtcctcaattcttggtaatggatttgccgtaata
tatctagcatcgcagatgctggtgaaccgttcaaatgaacgtggctacctggttggctct
cgggggtctgttggctctagttttgttgcaacaatgattggaattactgaggtaaatcct
atgccacctcattatttatgtcctaaatgccaacactcagagtttatcacggatggttct
tatggctctggctttgatttgcctgataaggagtgctcagaatgtggaactgagtataaa
aaagatggtcaggatattcctttcgagaccttcctcggttttgatggggataaggttcct
gatattgatttgaacttctcaggagatgatcagccgtcggctcacttggatgtacgtgat
atttttggagagcaatatgccttccgtgctggaacggtaggtactgttgcagatcggaca
gcttatggttttgtcaagggttacgaacgtgattacaataagttctatcgtgatgctgag
gttgatcgtttggctatgggtgttgctggggttaagcgaaatacaggtcagcacccaggt
ggtatcgttgttattccaaattatatggatgtctatgattttacacctgttcaatatccg
gctgatgatgtaactgctgcttggcagacaactcactttaacttccacgatatcgatgag
aacgtgttgaagctagatattctgggacatgatgatccgactatgattcgtaagttacag
gacctatcaggaattgatccaaaggatattcgagcagatgatccggatgtgatgaaactt
ttttcagggactgaggttttaggggtaacgcctgaacaaattgggacctcaacgggcgtg
ttgggaatccctgagtttgggactaactttgttcgtggtatggtcgaagagacgcatccg
acgacctttgcggaactcttacagttatctggtttatcccatggtacagatgtttggttg
ggtaatgcacaagatttgattaaggaaggtattgccaccctgaaaacagttatcggttgt
cgtgacgatatcatggtatacctaatgcatgcagggttagatcctaagatggcctttacc
attatggaacgtgtgcgtaagggaatgtggttgaaaatttctgaagaagagcgaaatggt
tatattcaagccatgcgtgaaaataatgttccggactggtatattgaatcttgtggtaaa
atcaagtacatgttccctaaagcccatgcggctgcctacgttatgatggcccttcgcgta
gcttatttcaaggtgcaccatcctatttattactattgtgcttacttctcgattcgagcc
aaagcatttgagcttaagacgatgtctgcagggctcgatgctgttaaagctcgaatggaa
gatattaaggagaagcgccaacgaaatgaagctactaatcttgaaaatgacttgtttaca
acgcttgaaattgtcaatgaaatgttagaacgtggctttacttttggccagttagatctt
tataagagtcaggcgactgaatttttgattgaaggagataccttgattcctccgtttatc
gcacttgaaggtttgggtgaaaacgttgcgaagcaattggttgctgcgcgtgaagaaggg
gaattcctctccaaaacagaattgcgtaaacgaggaggcctatcatcaaccttggttgaa
agattagatgaaatgggcattctaggaaatatgccagaagataatcagttaagtcttttt
gatgatttcttttaa
DBGET
integrated database retrieval system
