Streptococcus thermophilus LMD-9: STER_0114
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Entry
STER_0114 CDS
T00414
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STER_0114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ste03019
]
STER_0114
03016 Transfer RNA biogenesis [BR:
ste03016
]
STER_0114
Enzymes [BR:
ste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STER_0114
Messenger RNA biogenesis [BR:
ste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STER_0114
Transfer RNA biogenesis [BR:
ste03016
]
Prokaryotic type
tRNA degradation factors
STER_0114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_2
KH_2
OB_RRP5_4th
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABJ65463
UniProt:
Q03MV9
LinkDB
All DBs
Position
93284..95509
Genome browser
AA seq
741 aa
AA seq
DB search
MAKQTFEMTFEGRPLVVEVGQVAKQANGAVVVRYGDTTVLSVAVMSKKMATADFFPLQVN
YEEKMYAAGKFPGGFSKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYAAEDFIINPSASDKEVSHLDLIVAGT
KEAINMVEAGAQELSEDIMLQALLKGHEAIQELVDFQNYIVAAVGKEKAEVELFQVNADL
KAEIEAVYYDQLAKAVQVEEKLAREAATKAVKEEVLASYQERFAEDEDKETILRDVVEIL
EQMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEIDFLPKVHGSGLFTRGQTQALSVLTLA
PMSDTQLVDGLDPEYKKRFLHHYNFPQYSVGKTGRYGAPGRREIGHGVLGERALAQVLPS
VEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRLGITALQMDIKISGITPAILEEALAQAKVARFEILDVI
ESAIAEPRSELAPTAPKIDSIQIPVDKIKVVIGKGGETIDKIIAETGVTIDIDEEGLVQI
FSSDQDAIDRAKTIISDLVREAKVGEVYTVPVVRIEKFGAFVHLFNKTDALVHISELAWK
HTEHVEDVVKVGDMVTVKIIKIDEKGRVDASIKTLLPKPEKNEDGENGEEHRHCCCSHHK
PDHHSESMEAPKKSDESETKE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaacttttgagatgacctttgaaggacgcccacttgttgtggaagtggga
caggtagccaagcaggctaatggtgccgttgtagtacgttatggagatacaaccgtattg
tcagtagctgttatgtctaaaaagatggcaactgcagatttctttcctttacaggttaat
tatgaggaaaaaatgtatgcggctggtaagttcccaggaggctttagcaagcgtgaggga
cgaccttcgactgatgccactttgactgctcgtcttattgaccgtcctattcgtcccatg
tttgcggagggttttcgtaatgaagttcaagtcattaatactgttctctcttatgatgag
aatgctagtgcgccaatggccgctatgtttgggagttctttagcactttctatttcggat
attcctttcaatggtcctattgctggggttcaagtggcttatgcagcggaagatttcatc
atcaacccaagtgcatcagataaagaagtttcacatttagacttgatagtggcaggtacc
aaggaagccatcaatatggtagaagcaggtgctcaggaattgtcagaggacatcatgttg
caagcacttttgaagggacatgaagctattcaagagttggttgatttccaaaattatatt
gttgcggctgttggtaaggaaaaggctgaggttgaactgttccaagtgaatgctgatttg
aaggctgaaattgaagcagtttattatgatcagttagctaaggctgttcaggtggaagaa
aaactggcgcgtgaggcagcaaccaaggctgttaaagaagaggtcctcgcttcttatcaa
gaacgttttgcagaagatgaggataaggaaaccattctacgtgatgtggtagaaatcctt
gagcagatggaacatgctgaagtgcgccgtctgattacagaagacaaggttcgtcctgat
ggtcgtcgtgtggatgaaattcgtcctttggatgctgaaattgactttctgccaaaggtt
catggatcaggtctctttacacgtgggcaaacccaggccttatcagtcttgactttagcc
cctatgagtgatacacaactcgttgatggtttggatccagagtataagaaacgtttcctt
caccactacaatttccctcagtattcggtgggtaaaacagggcgttacggtgcaccaggc
cgtcgtgaaattggtcacggagttttaggtgaacgtgcccttgctcaagttcttccaagc
gttgaagagtttccatatgctatccgtttggtagctgaagtcttggagtcaaatggttct
tcttcacaggcttctatttgtgcaggcactttggctcttatggccggtggggtgccgatt
aaggcacctgttgcgggaattgccatgggtcttatttcagatggaaccaactacactgtt
ctaaccgacattcaaggtttagaagatcattttggtgatatggactttaaggtggctggt
acacgtctaggtattacagctcttcagatggatattaagatttcaggaattacacctgct
attcttgaggaagctttagctcaagctaaggtggcacgttttgaaattcttgatgttatt
gagtcagcgattgctgaaccacgttcggaattggccccaacagctcctaagatcgatagt
attcagattcctgttgacaagattaaggttgtcatcggtaagggtggtgaaaccattgac
aagattatcgctgagacaggtgtcacaattgatatcgatgaagaaggactcgttcagatt
ttctctagtgatcaggatgctattgaccgtgctaaaacaatcatctctgaccttgtacgt
gaagctaaggttggcgaggtctacaccgtaccagttgtgcgtattgaaaagttcggtgcc
tttgtccacctcttcaataagactgatgccttagtccacatttcagaattagcttggaaa
cacactgagcatgttgaagatgtggttaaggttggggatatggtaaccgttaaaattatc
aaaattgatgaaaaaggtcgtgttgatgcttcaatcaaaaccttgcttcctaaacctgaa
aaaaatgaagacggggaaaatggagaagagcatcgtcactgctgttgttctcatcataaa
ccagaccatcatagtgaaagtatggaagcaccgaaaaaaagtgatgaatcagaaacgaaa
gaataa
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