Streptococcus thermophilus LMD-9: STER_0669
Help
Entry
STER_0669 CDS
T00414
Name
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STER_0669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_0669
Enzymes [BR:
ste01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
STER_0669
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STER_0669
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STER_0669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
Zn_ribbon_TFIIB
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ABJ65929
LinkDB
All DBs
Position
606516..607337
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL
IFDFGQLIIISHLRMEGKYLLFTDQVPDNKHFHLFFKLDDGSTLVYQDVRKFGTFDLLDR
KQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGLGNIYVDEVLW
AAKVHPETPANKLSKAAMKRVHDQTIAILQLGIAKGGSTIRTYRNALGEDGTMQNYLQVY
GKTGQPCPRCASMIVKIKLGGRGTHLCPHCQKR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacctgaggtagaaacagttagacgaggtttagaaaagctgttactagga
aggactattttgtcacttgaagttaaggtccctaaaatgatcaagacatcatacgatagt
tttttgcatgatttgcctggtcagacgattcaagccatgcgacgtaggggaaagtatctc
atttttgattttggtcagttgataataatttctcacttacgcatggagggaaaatatctg
ctgttcacagaccaggttcctgacaacaaacattttcacctcttttttaagctagatgat
ggctcaaccctagtttatcaggatgtacgtaagtttgggacttttgatttattggatagg
aaacaagaagaggcctattttacaaggaaaaaacttggccctgagcctaccaagaagacc
tttaaatatgtaccgtttgagagagccttaatgcattctggcaagtctattaagccctta
ctcttggagcagaagttagtagccggtctaggaaatatctacgttgatgaggtgctttgg
gcagccaaggttcatcctgagacaccagcaaataaacttagcaaggcagccatgaaacgg
gttcacgatcaaacgattgccattttacagctggggattgctaagggtggttccactata
aggacctatcgtaacgcccttggtgaggatgggaccatgcagaattatctacaggtttat
ggaaagacaggtcaaccttgtccacgttgcgcaagcatgattgtgaaaatcaagttagga
ggaagaggaacacatttgtgtcctcattgtcaaaaacgatga
DBGET
integrated database retrieval system
