Streptococcus thermophilus LMD-9: STER_0994
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Entry
STER_0994 CDS
T00414
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03420
Nucleotide excision repair
ste03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STER_0994
03430 Mismatch repair
STER_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_0994
Enzymes [BR:
ste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STER_0994
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STER_0994
MMR (mismatch excision repair)
Other MMR factors
STER_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ66206
LinkDB
All DBs
Position
915311..917623
Genome browser
AA seq
770 aa
AA seq
DB search
MNPLLTGMNDQQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWNILAITF
TNKAAREMRERAVALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWNERAILGTISNAKNDLLDEIAYEHQAGDMYTQIVAKCYKAYQEELR
RSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANDVIKNNRN
RRPKKLWTQNDEGEQIVYYRANDERDEAVFVASTIDNIVREKVKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANTSDNISFERVVNEPKRGVGPG
TLEKLRNFAYEQNMSLLDASANIMLSPIKGKAAQGVYDFANMILNLRDQLDGLSITDTVE
AILDKSGYLDALSMQQTLESQSRIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLND
LALIADTDDGEAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEEPDELEEERR
LAYVGITRAEEILFLTNANTRTLFGKTGYNRPSRFLREISDDLLQYQGLARPANSSFGVR
FTKEEPIQFGQGMSLQQALQTRKANAQPQKHTGGAQPFSKATGGLPFSKASDSGNSATDW
EIGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLASVAPIVKK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaactggtatgaatgatcaacaagccgaagcagtccaaacgactgaa
ggccctcttttgattatggctggtgctggatcaggtaagactcgtgtccttacccatcgc
attgcctaccttatcgacgaaaaaatgatcaatccttggaatattttggccattaccttt
accaataaggctgcccgtgaaatgcgtgaacgtgcagtggctttaaatcccgcaacttca
gaaaccttgattgcgaccttccatagcatgtgtgtacgaatccttcgtcgtgaagcggat
catattggctacaacagaaactttactattgtagatccaggagaacaacgtactttgatg
aaacgtattctcaagaatctgaatttagatcctaaaaagtggaatgaacgtgccatttta
gggaccatttctaacgccaaaaatgacctcttagatgagatagcttatgagcatcaagct
ggtgacatgtatacgcaaatcgtagccaaatgttacaaggcctatcaagaagaacttcgt
cgtagtgaggccatggatttcgacgatttgattatgatgactcttcgtctctttgacaaa
aatcccgatgtcctcgcttattatcagcaacgttatcagtacattcacgtagatgagtat
caagataccaaccatgctcaataccaattggtaaaactcctagcttcacgctttaagaat
atctgtgtcgtgggtgatgctgaccaatcaatctatggatggcgtggagctgatatgcag
aacattcttgattttgagaaggattatcctgaagctaaggttgtccttctggaagaaaac
taccgttcaaccaagaaaattcttcaagcggctaacgatgtcatcaagaacaaccgcaac
cgccgtcctaagaaactttggactcaaaatgatgaaggtgaacagattgtttattaccgt
gctaacgacgagcgtgatgaagctgtattcgtagcttcaacaatcgataatatcgtccgt
gaaaaagtcaagaatttcaaagacttcgctgttctttaccgtaccaatgctcagtctcgt
accattgaggaagccttgctcaagtctaatattccatatacaatggttggtgggacaaaa
ttctacagccgtaaagagattcgtgatgttatttcttatttgaacttgattgccaacact
tcggataacattagttttgaacgtgtcgtcaatgaacctaaacgtggagttgggcctggc
acacttgaaaagcttcggaactttgcctatgagcaaaacatgagtctcctagatgcttca
gctaatatcatgttgtctcccattaaagggaaagcagctcaaggtgtttacgatttcgct
aacatgattctgaacctacgtgatcagttggatgggctaagcattaccgatactgtagaa
gctattttagacaagtctggttatctggatgctctgtccatgcaacaaacgcttgaaagc
caatcacgcattgaaaatatcgaagagttcatgtctgtaacaaagaatttcgacgagact
aatacagatggaactgaagatgagacaggcattgaccgtttaggccgtttcttgaatgat
ttggctttgattgctgacacggacgatggtgaggctgaggcagcagaagtaaccttaatg
accctccacgccgccaaagggcttgaattcccagttgtcttcctaattggtatggaagaa
ggagtcttccctttgtcacgtgcttcagaagagccagatgaactcgaagaagagcgtcgt
ttggcttacgtaggtatcactcgtgcggaagagattcttttccttaccaacgctaatacg
cgtacgctttttggtaagactggctataatcgtcctagccgtttcttacgtgaaatttca
gatgatttattacaatatcaaggtctagcacgtccagccaattcatcatttggtgttcgt
tttacaaaggaagagccgatacaatttggtcagggcatgagtttacaacaagcgcttcag
accagaaaagcaaatgcacagccgcaaaaacatactggtggcgctcagccattttcaaaa
gctactgggggactaccttttagtaaggcttcagactctggaaactcagctacagattgg
gaaatcggagatatcgctcaccacaagaaatggggagatggtaccgtcctagaagtaact
ggaagtggcaagacacaggaacttaagataaaatttccagaagttggacttaaaaaagtc
ttggcaagcgtagcacctattgtgaagaaatag
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