Streptococcus thermophilus LMD-9: STER_1000
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Entry
STER_1000 CDS
T00414
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ste
Streptococcus thermophilus LMD-9
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ste03016
]
STER_1000
Enzymes [BR:
ste01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STER_1000
Transfer RNA biogenesis [BR:
ste03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STER_1000
Prokaryotic type
STER_1000
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
ABJ66210
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All DBs
Position
922860..923702
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AA seq
280 aa
AA seq
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MTSHDAVFKLRKILHEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYMTEAGKVYEGEITI
GFSTTTEDASGEVVQTTPITELDGATVDQAMASFEGEITQIPPMYSAVKINGKKLYEYAR
AGEEVERPQRQVKITEFVRTSPIELENGTARFTFRVACSKGTYVRTLSVDLGVKLGFASH
MSALRRTASAGLTLDSSLTLSQISEMVEAGDQSFLLPIEFGVQDLPAVQVTEDDAKEISF
GRFISINSQEPLVAAFLGDKVLAIMEKRGQVYKPRKVLSQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcatgatgctgtttttaaactacgcaaaatattacatgagaaaaaaattggg
cacggcggaactcttgatccagatgttactggtgttctacctatagcagttggaaaagct
actcgtgttattgaatacatgactgaagcgggtaaagtctatgaaggcgaaatcactatt
ggattttcgacaactaccgaagatgctagtggagaagtcgtccaaacaactccaataaca
gagctagatggagcaactgtcgatcaggcgatggctagttttgagggagaaatcacacaa
attcctcctatgtattcagcggttaagatcaacggaaagaaactttatgagtacgcccga
gctggagaagaagttgaacgtcctcaacgtcaggtgaaaattaccgagtttgtccgaacc
tcacctattgagctagaaaacggtactgcaagattcaccttccgtgttgcttgtagtaaa
ggaacttatgtccgcaccttatctgttgatttgggtgtaaaactaggctttgctagtcat
atgtctgctctgcgtcgaacagcttctgcaggtttaacattagattcatccctaactctg
tcacaaatttctgaaatggtagaagcaggagaccagtccttcctactccctattgaattt
ggcgttcaggacctgccagccgtacaagtcactgaagatgatgccaaagaaatctcattt
ggtcgctttatttcaattaatagccaagagcctttggttgctgcctttttgggcgacaaa
gttctagctattatggaaaagcgaggtcaagtctataaacctagaaaagtattaagtcaa
tga
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