Streptococcus thermophilus LMD-9: STER_1041
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Entry
STER_1041 CDS
T00414
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STER_1041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_1041
Enzymes [BR:
ste01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
STER_1041
DNA repair and recombination proteins [BR:
ste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STER_1041
Prokaryotic type
STER_1041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABJ66246
UniProt:
Q03KM6
LinkDB
All DBs
Position
complement(966458..967111)
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AA seq
217 aa
AA seq
DB search
MEHSTWHRLLKEELPNHYFSKINQFMDKVYEEGTIYPPRDKVFNALLETPFEEVRVVILG
QDPYHGPNQAQGLSFSVPETIPAPPSLVNILKELGEDLGPRSHHDLTTWAEQGVLLLNAC
LTVPAGRANGHAGQIWEPFTDAVIKVLNQKDTPVVFILWGGYARKKKSLVTNPKHAIIES
AHPSPLSAYRGFFGSKPFSKANAYLVSQGQPPIDWLK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggaacattcgacatggcacaggcttctaaaagaggaattgcctaaccattatttttca
aagataaatcagtttatggacaaggtctatgaagagggaacaatttatcccccacgagac
aaggtatttaatgctttgttagagactccttttgaagaagtccgggtggttatccttgga
caggacccttaccatggtcctaatcaggctcagggtttgtcattttcagtacctgagacg
attccagctccaccttctttggttaatattctcaaagaattgggggaggatcttggtcct
agaagtcatcatgatttaacaacttgggccgagcaaggagtgctattacttaatgcctgt
ctgactgttccagctggtcgagccaatggtcatgctggtcagatttgggaaccttttaca
gatgctgtgattaaggttctcaatcaaaaggatactccggttgtctttatactttggggc
ggctatgctcgtaagaagaaatcactagtaaccaatcctaagcatgccattattgagagt
gctcatcctagccctttatcggcctatcgcggtttttttggcagcaagcctttttcaaaa
gccaatgcctacctcgtatctcaaggacaacccccaattgattggttgaagtaa
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