Streptococcus thermophilus LMD-9: STER_1682
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Entry
STER_1682 CDS
T00414
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ste
Streptococcus thermophilus LMD-9
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_1682
Enzymes [BR:
ste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STER_1682
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STER_1682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ABJ66825
UniProt:
Q03IZ7
LinkDB
All DBs
Position
complement(1571301..1574621)
Genome browser
AA seq
1106 aa
AA seq
DB search
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITV
TRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVD
LYKELQQANMTVLDLQHLNQVEKQEDLVRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGH
LDEALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVIPDYVTTDKEGNRSFARISRLLESRHDFSTVDETVTEQDKHALKVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLHVGQIFRKFDIPYYFGKEES
MSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHK
FLSDFTANSRDKYNLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLEAVQLPSQM
FELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLSVDDFLSILRSGMLACDYRTVP
ATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRL
DIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDMSVYLKELLDLGIPLVEKGR
NRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVRYLRKRLDKDQVLIPK
VIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLRYVLELEELESIHPDA
RHHGTYLHRVFERVMGDSSSESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDI
ARSTASVLRDNAAVKVEREEVKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKTGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLAQIGLEKLAAQAHK
ELTYKGLFVSSETEHLTGGNYDLQKTVTYDKEDLETLLDYNIKLFRSAAEVIRSGNFAIN
PYTEDGKSVQGDQIKSITHFEADRHMGQARKLLRLPKKGKKEAYLELMAKTEEENQMQVS
ENTISFPVIDHAVRVDKKDQEDNHVD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacggatatgtctcaggatttaacagaaattctgacggagcaggcg
tctagctatgctcaaaagggaaagagggttttttatattgctcctagtgccctgtccttt
gaaaaggagcgaaaggttttagaatacctgcctcagtcagcatcttttgacattacggtg
actcgttttactcagatggctaggtattttattctcaatacgagtaacccaaagactcag
ttggatgatacaggtttggccatgattttttataaagtgttgttgcacatgggcgatgat
gagctcaaggtctatggccgtttgcgtaaggatagcaactttattaatcaattagtggac
ctttataaagagttgcagcaggccaatatgacagtattggatttgcagcatttgaatcag
gttgaaaaacaagaggatttggtaaggattttcagtgcagctcaggacctcttgttggca
ggagattttgacaatcaatcaaagcttagtgccttctttaaggaaattacctcagggcat
ctggatgaggccttgagtaacacagttttggtcattgatggttttacccgtttctcggct
gaggaggaggctctggttgcactcttgaacgacaagtgccaccagattgtagtggggacc
tatactagtcaaaaagcttataaggccaattttgtttatggcaatgtttatcaagcctca
gtagatttcttgaggactttggctcagacctataaggtgatacccgactacgtgacgaca
gacaaggagggcaatcgttcttttgcgcgtattagtcgtcttttggagagccgtcatgac
tttagtacggtagatgagacggtaactgagcaggataagcatgccctgaaggtttgggaa
gtggtcaaccagaaagaagaagtggcccaggttgccaagagtattcgccagttgctggca
gatggcaagcgttacaaggatattttggtcttgcttggtgacgaggagagttataagctt
cacgtggggcagattttccgaaaatttgatattccttattattttggtaaggaagaaagc
atgtctagccatcctttggtggagtttgtggattcgctagagcgtatcaagcgctataac
taccgtgctgaggatttgcttaaccttgtaaaatccggtctctatggtggttttgctcaa
gaggatttagacctttttgagtattatgtcaattttgcggatatcaaggggcgtcataaa
ttcttgtctgattttacagctaatagtcgtgataagtataatttagaccagatcaatgcc
ttgcggtcacaattgatagagcccttggacaagtttcttaatagtcgcaaacaaaaggga
tctagtctactcaagaaactggtggtctttttagaggctgtgcaactgccaagtcagatg
tttgaattgtccaccaaggccagtgaagctgaaaaagaacagaatgaacaggtttggaag
gctttcactcatatcttggagcaggttgagactatctttggagacgaatcgctctcagtg
gacgactttttgtctatcttgcgttcgggaatgttggcctgtgattaccgtacggttcca
gccactgttgatgtggtcaatgtgaaaaaatacgacttaatacagccacattcggctccg
tatgtttttgccttggggatgacccagtcacattttcctaaggtaggacaaaataagagt
cttttgtctgatgaggagcgtagtcgtatcaatgaggcgacggatgagcacaggagattg
gatattgttacgcagatcaatagtaagcgaggtcattttgtggctatgtcgcttttcaat
gctgctagtgaacaattagtgcttagtcagccacaaattataaatgaaagtcaagatgac
atgtctgtttatttgaaggagcttcttgaccttggtattccattggtggaaaagggacgc
aatcgtttcgaagcaaagggggaccagattgggaactatagagaccttctgtcgactgtc
attgcccttaacagtagtcatttggatcttgacttggacaaagaaacccagactttctgg
tcggttgctgtacgctatctccgtaagcgacttgataaggatcaagtcttgattccaaag
gtgattgacgatgtgacgacaaccaaggtggacgatcaggtcatgcagttggtctttccg
gaggaagaaccactgaaattatcagctacagctctgacgaccttctataacaaccaatat
ctttatttcttgcgttatgttttggaacttgaggagctagagtctatccatccggatgct
cgacaccacgggacttatttacaccgagtctttgagcgtgtgatgggtgattcgtcatca
gaaagcttcgatgataaattggaaaaggccattgctcagaccaatcaggatcaacctttt
gaaattctctataccgaggaccaagagagtcgtttctctcgtcagattttggaggacatt
gcgcgttcaactgccagtgttctacgtgacaatgcggcggttaaggttgagcgtgaggaa
gtcaagtttgacttgcttttagcaaatagcatcaagattactgggattattgaccgagtg
gaccgtttaacagatggtgctctgggtgttgttgactataaaacaggtaaaaatgtcttt
gatattcagaaattctacaatggcctcagtccgcaattggtgacctatctggaggctctc
cgtcaaacctataaggttgatgctgatcaactttttggggctatgtatcttcacatgcag
gtcccacagcttaacctagctcagattggtttggaaaagctagcggctcaggctcataag
gaattgacttacaagggactttttgtgtcttcagaaacggagcatttgactggtggaaac
tatgatctgcaaaagactgtcacctatgacaaggaggatttagaaaccttgttggactac
aatattaagctctttaggagtgctgctgaagttattcgaagtgggaattttgcgatcaat
ccttatactgaggatggcaagtctgttcaaggggatcaaatcaagtctattactcacttc
gaggccgaccgccacatgggacaggctcgtaaactcttacgtttacccaaaaagggcaag
aaggaagcctatttggagttgatggcaaaaactgaggaagagaatcagatgcaagtttct
gaaaatactatctcctttccagtcattgatcatgctgtgagagtagacaaaaaagaccag
gaggataaccatgttgactaa
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