Streptococcus thermophilus LMD-9: STER_1722
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Entry
STER_1722 CDS
T00414
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STER_1722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_1722
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STER_1722
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STER_1722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_33
AAA_23
AAA_22
nSTAND3
AAA_14
AAA_18
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_21
Viral_helicase1
ATPase
NACHT
nSTAND6
NB-ARC
AAA_15
Septin
MMR_HSR1
cobW
PRK
NTPase_1
DUF87
MeaB
YobI-ATPase
DUF463
Dynamin_N
GCE_fung
Motif
Other DBs
NCBI-ProteinID:
ABJ66863
LinkDB
All DBs
Position
complement(1610393..1613218)
Genome browser
AA seq
941 aa
AA seq
DB search
MQDKLVIRGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGVPY
CINGHGAIKSSSVEQIVDEVLALPERTRMQILAPIVRRRKGQHKAIFERVQKDGYVRVRV
DGEIYDVTEVPELSKSKMHNIEVVVDRLVNKEGIRSRLFDSVEAALRLADGYLIVDTMDD
NELLYSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDIDLVIPDPSKTL
REGALAPWNPISSNYYPAMLEQAMEQFGVDMDTPFENLKKEEQDLILYGSGDREFHFHYV
NDFGRVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYMNELSCPTCHGYRLNEAALSV
RVGGEDGLNIGQISELSISDHLQEIDRLELGENEEMIARPIIKEIKDRLTFLNNVGLNYL
TLSRMAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLG
NTLIVVEHDEDTMREADWLIDVGPGAGAFGGQIIASGTPEAVARNKKSITGQYLSGAKSI
PVPTERRVGNGCFIEVKGASENNLKNVSVKFPLGKLIAVTGVSGSGKSTLVNSILKKKIA
QELNRNSEKPGKHKSVTGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVRY
KGKNIAEILDMTVDDAVDFFAAIPKIARKVQTIKDVGLGYVTLGQSATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGTIVATGTPEEVVAVPKSYTGQYLKEKLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataagttagtgattcgcggagcaagagctcacaatttaaaaaatattgatgta
gagattcctcgtgacaagctcgtcgtcgtgacggggttgtcggggtctggtaagtcttct
ttggcttttgatacaatttatgcagagggtcagcgccgttatgttgaaagtctctcagct
tatgcccgccaattcttgggaaatatggagaaacctgatgtggactcgattgatggcttg
agtcctgccatctccattgatcagaaaacaacgagtaagaaccctcgttcgactgtggga
actgtaacggagattaatgactatcttcgtctcctttatgcgcgtgtgggtgtgccttat
tgtatcaatgggcatggagccattaagtcgtcatcagtggaacagattgtagatgaggtt
ttagcccttcctgaacggacacgtatgcagattttagcgccgattgtccgtcgtcgaaag
gggcaacacaaggcgatttttgagcgcgtgcagaaggacggttatgttcgtgttcgtgtg
gatggtgagatatacgatgtgacggaagtccctgagctatccaagtcgaagatgcataat
attgaggtggttgtggaccgtttggttaataaggaaggtatccgtagtcgtctctttgac
tcagtcgaggcagcgctacgtttagcggatggctacttgattgtggatactatggatgat
aatgaattgctctactcggagcattattcttgtccagtttgtggttttacagtgcctgag
ttggagccgcgtctcttttccttcaatgcgccatttggttcttgtccgacctgtgacggt
ttaggaaataaactagaagttgatattgatttggtcattcctgaccctagtaagaccttg
cgtgaaggtgcactagcgccttggaatcctatctcatccaactactatcctgccatgctt
gagcaggccatggaacagtttggcgtggatatggatacgccatttgaaaatcttaaaaaa
gaagaacaagatttgattctctacggatctggtgaccgcgagttccatttccattatgtt
aatgattttggtagggtgcgtgatattgacattccttttgaaggggttgtgactaatatc
aatcgacgctatcatgagactaacagtgatttcacccgcaatgtcatgcgtggttatatg
aatgaactgtcatgtccaacttgtcatggctatcgtcttaacgaagcagcactctcggtt
cgtgttggtggtgaggatggcttaaatattggtcaaatttctgagctgtctatttctgat
catcttcaagaaatagatcgccttgaattaggtgagaatgaagaaatgattgcccgtcca
attatcaaggaaatcaaggatcgtctgactttcttaaacaatgtcggccttaattacttg
actctctctcgtatggccggaacactttcaggtggtgagagtcagcgtatccgtttggcg
acacagattggctccaacctttctggagtcctttatgttttggatgagccctctataggt
cttcatcagcgtgataatgatcgcttgatttcaagtcttaaaaagatgcgtgatttgggc
aataccttaattgtggtggagcatgatgaagataccatgcgtgaagctgactggcttatc
gatgtaggacctggcgccggtgcctttggtggacaaatcatagcttcaggaaccccagaa
gcagttgctagaaataagaaatcaattactggtcagtacctgtcaggtgctaaatcaatt
cctgtaccgacggaacgccgtgtaggaaacggctgttttatcgaggttaaaggagccagt
gaaaataatcttaaaaatgtgtctgtcaagttcccacttggaaaattaatcgcagtgaca
ggcgtttctggttctggaaagtcaactttggttaacagtattctcaagaaaaagattgcc
caagagcttaatcgaaacagtgagaaacctgggaaacataaatcggtgactggaatcgag
aatatcgagcgtttgattgatattgatcaaagtccaatcgggcgtactccacgttccaac
cctgcaacctacacaggcgtcttcgacgatattcgcgatctttttgctcaaaccaatgag
gccaagattcgcggttataagaagggacgtttctctttcaatgtcaaaggtggccgttgt
gaagcctgctctggtgatgggattatcaagattgagatgcacttcttgcctgatgtttat
gtaccttgtgaggtttgccatggcacacgctataattctgagaccttagaagttcgttat
aaagggaagaatattgctgaaattctggatatgacagttgatgacgcggttgatttcttt
gcggctatccctaagattgctcgtaaggtgcagacaatcaaggatgtggggctcgggtat
gtgactttggggcaatcagcaacaaccctatcaggtggtgaggcacagcgtatgaaactg
gctagtgaacttcacaaacgctctactgggaagtctttctacattctcgatgagcctacg
actggtctccatacagatgatattgctcgtctcttgaaggtgcttcagcgttttgtggac
gatggtaacacggttctcgtgattgagcacaatctggatgttattaagacagcagaccat
atcattgatttgggtcctgaaggtggtgttggtggaggtactatcgtagctacagggact
ccagaagaggtagtagccgttcccaaaagctatacaggacaatatttgaaagaaaaattg
aaataa
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