KEGG   Streptococcus thermophilus LMD-9: STER_1749
Entry
STER_1749         CDS       T00414                                 
Name
(GenBank) mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ste  Streptococcus thermophilus LMD-9
Pathway
ste03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ste00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STER_1749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ste03019]
    STER_1749
Messenger RNA biogenesis [BR:ste03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     STER_1749
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL SIS_2
Other DBs
NCBI-ProteinID: ABJ66890
LinkDB
Position
1636421..1638103
AA seq 560 aa
MASKINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDY
SYIVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDA
QLYEINADTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVGEPAD
LHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFR
LQQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILC
TGSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIH
GKINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME
NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFNS
KMILAGPDILSRGFIYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRPF
LYEKTEREPIIIPMILTPDN
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcatcaaaaatcaatctaaaacctgaagaagttggggtttatgcgattggtggtttg
ggagaaatcggtaaaaatacctatggtattgaataccaggatgaaatcatcatcgtcgat
gcgggtattaaattccctgaagatgatcttctcggtatcgattatgtcatcccggactat
tcttacatcgttgaaaacgttgaccgtgttaaggctcttgtcgttactcacggtcacgaa
gaccatattggtggtatccccttccttcttaaacaggcaaatatcccaatctatgcagga
ccacttgctcttgctcttatcaaaggaaaattggaagaacacggactactacgtgatgca
caactctatgaaattaacgctgatacagagcttactttcaaaaatatgagcgtaaccttc
ttccgcacaactcactcaattccagaacctctcggaattgtcatccatacaccacaaggt
aaaattgtttgtaccggtgactttaagttcgacctcactccagtaggtgagccagcagac
cttcatcgtatggctgcactcggtgaagaaggcgttctttgcctcctctcagactcaacc
aatgctgaagtcccaactttcactaattccgagaaggtcgttggacaatccatcatgaaa
ataattgaaggcattcacggacgtattatcttcgcctcatttgcctctaatattttccgt
cttcaacaagctgctgaggctgctgtaaaaaccggtcgtaagattgttgtctttggacgt
tctatggagaaagccattgttaatggtgttgaactaggctatatcaaagttccaaaagga
actattattgatcctagtgaaatgaaaaactatcatgccagtgagattcttatcttgtgt
accggttctcaaggggagcctatggcggcccttgcacgtattgccaatggtatgcaccga
caagtaacactacaacctggtgacaccgttatcttctcatctagccctatcccaggaaat
acaaccagcgttaaccgtttgattaataccattcaagaagcgggtgtagatgttattcac
ggtaaaatcaacaatatccatacctctggtcacggtggtcaacaagagcaaaaactaatg
cttcgcttgataaaaccaaaattcttcatgcctgttcatggtgaataccgcatgcaaaag
gtccacgcagatctcgctgttgattgtggtgttccgaaagagaatatctttatcatggaa
aatggtgatgtcttagccctaacaaaagattctgctcgtcgtgcaggtcatttcaatgct
caagacatctatgtcgatggtaatggtatcggtgatattggggcggccgttcttcgtgac
cgtcgtgatctctctggagatggtgtcgtccttgctgtcgcaactgttgacttcaattct
aagatgattctagctggtccagatattctcagtcgtggatttatctatatgcgtgaatct
ggtgatcttattcgtgatagccaacgcattctattcaacgctattcgtattgctcttaaa
aataaagacgccagcattcaatccgttaacggagctatcgtcaatgcattacgaccattc
ctatacgaaaaaacagaacgtgagccaattatcattcccatgattctcacacctgataac
taa

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