Sporolactobacillus terrae: C0679_00815
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Entry
C0679_00815 CDS
T05792
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stea
Sporolactobacillus terrae
Pathway
stea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C0679_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stea03021
]
C0679_00815
03400 DNA repair and recombination proteins [BR:
stea03400
]
C0679_00815
Enzymes [BR:
stea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C0679_00815
Transcription machinery [BR:
stea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C0679_00815
DNA repair and recombination proteins [BR:
stea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C0679_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
SAM_EPH
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QAA24272
LinkDB
All DBs
Position
146443..147387
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIDTVEIADDGSYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTTVQFDT
VLHEFSTIEGVVEDVTAIILNIKKLCLKIYSDEDKTLEIDVQRPGKVTAADIIHDSDVEI
LNPELEIATLDEGAHFHLRMIAKKGRGYVPAEGNKSEDLPIAVIPIDSIYTPITRVNYQV
EKTRVGQFANFDKLTIDVWTDGSIRPEEAVSLGAKILTEHLNIFVGLTDQAQKAEIMIEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKSEEDMMKVRNLGRKSLEEVE
EKLQDLGLGLRIEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgagatcgaaaagccaaagatcgacacggttgaaatagcagacgatggaagctat
ggcaagtttgttgttgaaccgctcgaacgcggatacggcacgactctggggaattcttta
cgtcgaattttactttcatccctcccaggcgcggctgtaacgacggtacagtttgatact
gtgcttcatgaattttccaccattgaaggcgttgtggaagatgttacggcgatcatcttg
aatattaaaaagctctgcttgaaaatctattcagatgaagacaagacattggaaattgac
gttcagagaccggggaaagtgacggctgctgatattatccatgacagtgacgtggaaata
ttaaatcctgaattggaaattgcgacacttgatgaaggtgctcattttcacctgcgaatg
attgccaagaagggccgcggctatgttcctgctgaaggaaacaaatccgaggatcttcca
attgccgtaattcctattgattcgatttacacgccaattacgcgtgtaaattatcaagtg
gaaaaaaccagagttggtcagtttgctaatttcgacaaactaacgatcgatgtttggacc
gatggaagcattcgtcctgaagaagcagtttctctgggtgccaaaattctgaccgaacat
ctgaatatcttcgtcggactgactgatcaagcgcaaaaagcggagatcatgatcgaaaaa
gaagaagataagaaggaaaaagtgcttgaaatgacgattgaagagctggatctttccgta
cgttcttacaattgcctgaaacgcgctggaatcaataccgttcaagaactgacccaaaag
agtgaagaagacatgatgaaggttcgtaatcttggacgcaaatctcttgaagaagttgaa
gaaaagctccaggatcttggtctcggactaagaattgaagagtaa
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