Sporolactobacillus terrae: C0679_04795
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Entry
C0679_04795 CDS
T05792
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
stea
Sporolactobacillus terrae
Pathway
stea02020
Two-component system
stea02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C0679_04795 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C0679_04795 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stea03021
]
C0679_04795 (rpoN)
Transcription machinery [BR:
stea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C0679_04795 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Tnp_ISL3
SUS_N
SIR2_2
KIF9
Motif
Other DBs
NCBI-ProteinID:
QAA24965
LinkDB
All DBs
Position
992178..993485
Genome browser
AA seq
435 aa
AA seq
DB search
MGLALVQRQALKLKMTPALYQSVAVLQCNNEELTHLIREKALENPLLNVADSDLHRDDLF
SFKGAKSTSDVIAETQAQMIDFRERLHRELHQMRLEPCCIEATDLLIDSLNDNGYLDEAP
DAILDPFAKGDVDPQQALALLQSLDPAGVGARSLIECLCLQLRRLESRSPLAETLLTDYR
DCFLSGDWSELAEQMDVTKDEINAAVAQIRRLNPNPVAAIQEDPPQYIIPDVTIVQKGDR
LVCELEDQYLPTVSINNDDYQMYLQASDKETKRYLREKMEEADALISGLSRRKQTMMQLA
ELVMQRQEAYFSTGERTSLRPFTMKQAAEQLAVHESTISRAAAGKYVQTNHGIVPMRQFF
IRAVGKNQTALSAYQIQDEIKKLINQEDPRRPLSDQIIAGILGQSGIKCSRRAVAKYRQR
CGIGSTIERRAVARA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggattagcacttgttcaaaggcaagcgttaaagttaaaaatgacgccggccctatat
caatccgtggccgttctgcagtgtaataatgaggaacttacacatttaattcgtgaaaag
gcactggaaaatccgcttttgaacgtcgcagattcggatcttcatcgtgatgatcttttt
tcattcaagggagcgaaaagtacgtctgatgtcattgcagagacacaagcacaaatgatt
gattttcgcgagcggttacaccgcgagctccatcagatgcgtctggagccttgctgtatt
gaagcaactgatctgttgatcgattcgctgaatgacaacggctatcttgatgaagcgcct
gatgcgattctcgacccgtttgcaaagggtgatgtcgatccgcagcaagccttggcgctg
cttcagtcgttggatcccgccggtgttggtgcccgctcactcattgaatgtctgtgtttg
cagctccgacgtcttgaatcgcgcagcccgctcgcagaaacgcttttaacggattacaga
gactgttttctgagcggagactggtccgaacttgccgagcagatggatgtaacaaaggat
gaaattaacgcagcggttgcgcaaattcgtagactgaatccgaatccggttgccgcgatt
caagaggatccgccgcagtatatcattcctgatgtcacgatcgtgcaaaaaggtgatcgg
cttgtctgtgagcttgaggatcagtatttgccgaccgtttcgatcaataatgatgattat
caaatgtacctgcaggcatcggataaagaaacaaaacgctacctgcgggaaaagatggaa
gaagcggacgcactgatctcgggattatccagaagaaaacaaaccatgatgcagctcgcc
gaattggtgatgcagcgtcaggaggcctatttcagtactggagaacgcacgtcgctgcgg
ccgttcaccatgaaacaagcggcggaacagttggctgttcatgaatcgacgatcagtcgt
gcggcagcgggaaaatacgttcaaacgaatcatggtattgtgccgatgaggcagttcttc
attcgagccgtcggaaaaaatcaaaccgcgttgtccgcttatcaaattcaagatgaaatc
aaaaagttgattaatcaggaagacccgagaagaccgttgtcggatcaaatcattgccggc
attcttggacagtcgggcatcaagtgttcccgaagagccgtagctaagtatcggcaacgg
tgcggcattggctcaacaattgagcgccgcgcggtcgcgcgcgcttga
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