Sporolactobacillus terrae: C0679_06900
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Entry
C0679_06900 CDS
T05792
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stea
Sporolactobacillus terrae
Pathway
stea03030
DNA replication
stea03430
Mismatch repair
stea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0679_06900 (polC)
03430 Mismatch repair
C0679_06900 (polC)
03440 Homologous recombination
C0679_06900 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stea03032
]
C0679_06900 (polC)
03400 DNA repair and recombination proteins [BR:
stea03400
]
C0679_06900 (polC)
Enzymes [BR:
stea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0679_06900 (polC)
DNA replication proteins [BR:
stea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0679_06900 (polC)
DNA repair and recombination proteins [BR:
stea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0679_06900 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
RNase_H_2
HHH_3
YhfH
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QAA25352
LinkDB
All DBs
Position
1434915..1439225
Genome browser
AA seq
1436 aa
AA seq
DB search
MTSTTAGTDRFELLLKHLEVPTEWMERYFTHGEIDKLSVFRSERRWHFDFLLDGILPYQV
YEWLEERLKAHFQSVVSQITFTVHVRDASRAEHYFSDYWQPVCERLCHEFPALKGCLQRQ
NPQLNERQLMISTTSDTEAGLIKRKLPKVLNEKLRTFGFPPISLEIKVSSEERTKAYDSF
VKQRDAEDKQKVVQAMIEMQKKKDAEDAAGDVPDGPFKIGYDIHDEPVSIETIQDEERRI
TIQGYIFDSEIRELRSGRTLLLFKITDYSDSLMVKVFSRDKEDAAKFAQMHKGMWAKVRG
GVQNDSFARDLVMIANDIEEITPHVKKDTAPEGHKRVELHAHTVMSQMDSVVTASALIKR
AKQWGHSAIAITDHGVAQSYPEAYAAGQKNGVKVIYGVEANLIDDGVPIAYNLAHRLLAD
ETYVVFDVETTGLSAVYDTIIELAAVKIKNGEVLEKFDQFANPHHPLPQKIIELTSITDE
MLADAPDADQVVQAFKQFAGDAVLVAHNATFDMGFLNTAYQKLGYEKADNPVIDTLELGR
FLYPEFKNHKLDTLCKAFNIELTHHHRAIYDTEATGYLAWKMLKDAAEKGMQYHDQLNDN
LGKGNLDRIRPSHIILLVKNQIGLKNLYKLISLSHVKYFYRVPRIPRSLLTKYREGLLVG
SGCDKGELFETMMQKSAELAEKVAEFYDYIEIQPPSNYQHLVEKGIVRDELALKDVMIKL
VKLGEKMNKPVVATGDVHYLDSHDKIYRKILIGSQAGNPLNRQTQPDVHFRTTDEMLGCM
SFLGEEKAEKVVVSDPHALANQIEEVLPVKDKLYTPTIDGAEDEVKEKTYGRAHKLYGET
LPDLVEKRLEKELKSIIGHGFSVIYLIAHKLVKKSLSDGYLVGSRGSVGSSLVATMLEIT
EVNPLPPHYLCLNCHHVEFFTDGAVACGFDLPDKACPECGTKMTKEGHDIPFETFLGFKG
DKVPDIDLNFSGDYQPVAHNYTKVLFGEDKVFRAGTIGTIADKTAYGYVKGYEEDTGKNL
RGAERDRLAAGCTGAKRTTGQHPGGIVVVPRDMEIFDFTPVQYPADDITAEWKTTHFDFH
SIHDNILKLDILGHDDPTVIRMLQDLSGIDPKTIPKDDKEVMKIFSSTESLGVSPEQIRC
KTGSLGIPEFGTRFVRQMLEDTKPTTFAELVQISGLSHGTDVWLGNAQVLIENGTCVLRD
VISCRDDIMIDLMHQGLEPSHAFKIMESVRKGKGLNDEWIAEMKENDVPGWYLDSCLKIK
YMFPKAHATAYVLMAFRIAYFKVHYPILFYATYFSVRADDFDVDVMKRGSDAIRAKMDEI
EKKGNDAMPKEKSLLTVLEVALEMCERGLSFQSVDLYRSDATRFLVEGDTLIPPFNAIPG
VGTNAAKAIAKSREDGEFLSKEDLQRRAKISKTILEYLDGQGCLKGMPDANQLSLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtacaacagccggaacggatcgatttgaactattgctcaaacatcttgaggtg
ccgacagagtggatggagcgctattttacgcatggtgaaatcgacaagctatctgttttc
cgttcggaacgtcgttggcattttgactttctccttgacggaattctcccctatcaagtc
tatgaatggttggaagaaagactgaaagcgcactttcagtcggtcgtatcgcaaattact
tttacagtgcacgtccgtgatgcttcacgtgccgaacactatttttccgattattggcag
ccggtttgcgaacgcctgtgtcatgaattcccagcattaaaaggatgtttgcagcggcaa
aatccgcaattaaatgaacggcagctgatgatttcaacgacgagcgatacagaagcaggg
cttattaaaagaaaattgcccaaggtacttaacgagaagttgcgtacttttgggtttcca
ccgatctcgcttgaaattaaagtcagttcagaagaacgaacgaaggcttatgactcattt
gtaaaacaaagagatgcagaagataagcagaaagttgttcaagcaatgattgaaatgcag
aaaaagaaggacgctgaggatgcggccggcgatgtaccggatggaccattcaagatcggt
tatgatattcatgatgaaccggtatccatcgagacgattcaggacgaagaacggcgcata
accatccaaggatatattttcgattccgagatacgagaactccgcagtggccgtacgctg
ctgctgtttaaaataaccgactattccgattcgctcatggtcaaagtcttttccagagac
aaagaagatgctgcaaagtttgcacaaatgcataaaggaatgtgggcaaaagtgcgcggc
ggtgtgcagaatgacagctttgccagagatttggtgatgatcgctaatgatatcgaggag
atcacccctcatgtaaaaaaagatacagctccagaggggcataagcgcgtcgaacttcac
gcgcacacggttatgagccagatggattcagtggttacggcgtcggccttgatcaagcga
gcgaaacaatgggggcactcagcgattgcgattaccgaccatggggttgcccagtcttat
ccggaagcctatgccgccggacagaaaaacggcgttaaagtaatctatggtgttgaagct
aatcttattgatgatggtgtaccgattgcctataatctagcgcaccggttgcttgctgat
gaaacttacgttgtctttgacgttgaaacgactggattatccgcggtttatgacacgatc
atcgagcttgccgcagttaagattaaaaacggtgaggtgctcgaaaagtttgatcaattt
gcaaatccgcatcatccgcttcctcagaaaatcattgagttaaccagtataacggatgaa
atgcttgctgacgcaccggatgcagatcaggttgtccaggcgtttaagcagtttgcaggg
gatgcagtgcttgtggcgcataatgcgaccttcgatatgggttttttaaatactgcctac
caaaagcttgggtatgaaaaagcggacaatccagttattgatacactcgaactgggccgc
tttctttaccctgaatttaaaaaccataagctcgatacgttgtgtaaagcctttaacatc
gagcttacccatcaccaccgggccatctacgacacggaagcaacgggttatcttgcttgg
aagatgctgaaggacgctgctgaaaaaggcatgcagtatcacgatcaattaaatgataat
cttggtaaaggaaatcttgatcggattcggccatcgcatattattctgctcgtgaagaac
caaatcggacttaaaaatctctataaattgatttcgctttcacatgttaaatacttttat
cgcgtacctagaattccgcgctcgttgttgacgaaatatcgagagggccttctggtcggt
tccggttgcgacaagggcgaactttttgaaacgatgatgcagaagtcggcggaactggca
gaaaaagtcgctgagttctatgattacattgaaattcagccgccgtccaactatcaacat
cttgtcgagaaagggatcgttcgcgatgaactggcgctcaaagatgttatgatcaagctt
gtaaagctgggtgagaaaatgaacaaaccggtggttgccactggagatgttcactatttg
gacagccatgataaaatctaccgtaagattttgatcggctctcaagcagggaatccgctc
aatcgtcagacgcagccggatgttcattttcgaacaacggatgaaatgctgggctgcatg
agctttcttggtgaagagaaggcagaaaaagttgttgtcagtgatcctcatgcacttgct
aaccaaattgaagaagtattaccggtcaaggacaagttatatacaccaacgattgacggc
gccgaagacgaagttaaagaaaagacctacggcagagcacataaactttacggtgagaca
cttccagatctggtcgaaaagcggcttgagaaagaactaaaaagtatcatcggacacggg
ttttccgtcatttatttgattgcccataaattggtgaagaagtcactctccgatggttat
cttgtaggatcacgtggatcggtcggttcgtcgctcgtggcgacaatgcttgagattacc
gaggttaatccgcttccgccgcattatctgtgtttgaattgtcatcatgttgagttcttt
accgatggcgcggttgcctgtgggtttgatcttccggataaagcttgtcctgaatgcgga
acaaagatgacaaaggaagggcatgatataccttttgaaacgttcctcggctttaagggg
gataaagttcccgacattgatttgaacttttccggagactatcagccggttgctcacaat
tatacgaaagtacttttcggtgaagataaagtattccgagccggaacaatcggcacgatt
gccgacaaaacggcctacggatatgtaaaaggatatgaagaagacacgggcaaaaaccta
cggggagcagagcgtgatcgtcttgcagcaggatgcacaggagcaaaacgaacaaccggt
cagcaccctggcggtatcgtcgttgtaccaagggatatggagatcttcgattttactccg
gttcaatatccggccgatgatataacggccgaatggaaaacgacacactttgattttcat
tcaatccatgacaacattttgaaattggatatactcgggcacgatgatccaaccgttatt
cgtatgctgcaggatctgagcggaatcgatccgaaaacaattcctaaagatgacaaagaa
gtcatgaaaatctttagttcaacggaatccctgggcgtttctccagaacaaatacgctgc
aaaaccggcagcctaggtattcctgaatttgggacgcgctttgttcggcagatgctcgaa
gacacgaaaccaacaacctttgctgagttggttcaaatctcaggcctgtctcacggtact
gatgtttggctgggcaatgcccaagtgttgatcgaaaatgggacctgcgtgcttcgcgat
gtcatttcctgccgcgacgatattatgatcgacttgatgcaccaaggccttgagccgtca
cacgcatttaaaatcatggagtccgtgcgaaagggaaaagggttaaatgacgaatggatt
gctgagatgaaggaaaacgatgtaccgggttggtatttggattcatgccttaaaatcaag
tacatgttcccgaaagcacacgcaacagcttatgttttaatggcattccgcatcgcctat
ttcaaagtgcattatccgattctgttctatgcaacctatttcagtgtgcgcgcggatgac
tttgatgtcgatgtgatgaaaagaggatccgatgcgatacgggcaaaaatggatgaaatt
gagaaaaaaggcaatgacgcgatgccaaaagaaaagagcttgctgactgtgcttgaagta
gcactcgagatgtgcgaacgcggactcagtttccaatcggtcgatttatatcgttcggat
gcaacacgttttctggtagaaggggatacgctgatcccaccatttaatgcaattcccggt
gtcgggactaatgctgctaaggcaattgccaaatcccgggaagatggtgaattcctttcg
aaagaagacttgcagcgccgagccaaaatctcaaagacaattcttgaatatcttgacggt
caaggttgcttgaaaggaatgcccgacgcaaatcaattatcgctattctga
DBGET
integrated database retrieval system
