Sporolactobacillus terrae: C0679_09830
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Entry
C0679_09830 CDS
T05792
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stea
Sporolactobacillus terrae
Pathway
stea03410
Base excision repair
stea03430
Mismatch repair
stea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0679_09830 (recJ)
03430 Mismatch repair
C0679_09830 (recJ)
03440 Homologous recombination
C0679_09830 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stea03400
]
C0679_09830 (recJ)
DNA repair and recombination proteins [BR:
stea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C0679_09830 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C0679_09830 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C0679_09830 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QAA25874
LinkDB
All DBs
Position
complement(2036479..2038809)
Genome browser
AA seq
776 aa
AA seq
DB search
MLESNNRWKIREVDEEKVQRLSESLHISVMTARLLVARGIEASKEAQLFLHEEEMKFYDP
MIMKGMREASSRIQQAIASGERIRIFGDYDADGVTSTAILTRALRACGADVTSYIPNRFK
DGYGPNIGAARQAKKDGITLIVTVDSGIAAFDPAECAGRMGIDYIITDHHEPPEQLPEAY
AILNPKQTDCPYPFKGLSGAGVALKLAQAVCDTAVFDEQWVALAAIGTIADLVPLIDENR
LIAAQGLRKINEGSLPGIDALKVKASGAGPIDSDGIGFQMGPRLNAAGRMTDAAEALDLL
LSEDMDEAVMLAERLDALNQQRRSIVDQIAKEADQQAAAYMDQGSKALVLSGEAWHQGVI
GIVASKIVGKYYRPVIILSIDKETEIAKGSGRSIEGFNLYEGLKACSNHLIQFGGHKMAA
GLSLAQTEIDHFRAAFNEQANHMLDAQELIPQLTVDGTAKVDDLSVELIEEVAKLAPFGT
DNPKPLFLIPQAPLAKLATVGRNNDHLKLTLKGSEKQLEGIGFGFGKWIQKIAPTDELAA
VGELGINEWNGFRKAQLMIRDLRVEGVQVYDWRALRDLQEKLQVLRAESVPLLTFQEDTA
AHFQLDDVMRYEPGMTLSGHVVALLDLPDDEEQLSAFLSTHPQLNRFYCIFYHSRDHYFS
AFPERDHFVWYYALIRQRHRFELRNMMRQIAGYKGWSEQSISLMTQVFFELGFVKIEKGI
LSEIPSPAKAPLTSSELYRKEKAQRDLEARFCYAPISEVKQWLIVQLRQSEKQGIK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaatcaaacaatcgttggaagataagagaagtagatgaagaaaaggtgcagcgg
ctctctgagtcgctgcatatttctgtgatgacggcacgtttgcttgttgctcgcggcatc
gaagcatcaaaagaggcccagcttttcttgcacgaagaagagatgaaattctatgatcct
atgatcatgaaaggaatgcgcgaggcttcatcgcgtatacagcaagcgatcgcttccggg
gaacggatacggatattcggcgattacgatgcggacggtgtgacgtcaacggcgattttg
acacgagcgctgcgcgcatgcggagcggatgtcacttcctatatcccgaatcgctttaag
gacggctatgggccgaatatcggcgctgcccggcaggcaaagaaggatggcatcacactg
atcgtcactgtggattcgggaattgctgcgtttgatcctgcagaatgtgccggacggatg
gggattgattacatcatcaccgatcatcatgagccgccggaacagctgcccgaggcgtac
gccatactgaatccgaaacaaacggattgtccttacccgtttaagggattatcaggagca
ggcgtcgcgcttaaattggcacaagcggtttgtgacacagctgtttttgatgagcagtgg
gtcgcactggctgcgatcggtacaatcgccgaccttgttccgcttatcgatgaaaacagg
ctgattgctgctcagggcttgagaaaaatcaacgaaggatcgctacccggcattgatgcg
ctgaaggtaaaagcgtcgggtgccggtcctattgacagtgatgggatcgggtttcaaatg
ggaccgcgattaaatgcagccggccgcatgacggatgctgcagaagcacttgatttgctc
ctgagcgaggacatggatgaagcggttatgctggcggagcggcttgatgcgttgaatcag
caacgccggtcgattgtcgatcagattgccaaggaagcagaccaacaagcagcagcttat
atggatcagggcagcaaagcccttgttctttcgggggaagcctggcatcagggtgttatt
ggcattgtagcatctaaaattgtcggcaagtattatcgtccggtgatcattctcagcatt
gacaaagaaacagagattgcgaagggatccggccgtagtatcgaaggatttaatctttat
gaaggtctgaaggcgtgcagcaatcatttgattcaattcggcggacacaaaatggcggcc
ggactgtctcttgcccaaacagagattgatcactttcgtgcagcatttaacgagcaagcg
aaccatatgctggatgcacaagagctcattccgcaactgacggttgacggtaccgctaaa
gtagatgatctttctgtcgagctgatcgaagaagtagcgaagctggctccgtttggaacc
gacaatccgaaaccgctattcctgattccacaagcgccgttggcgaagcttgctacagtt
ggccggaataacgatcatcttaagttgacgctgaaggggagcgaaaagcagctcgaaggc
atcggttttggctttggtaaatggatacagaaaatcgcacctacggatgaacttgctgcg
gttggcgaactgggcattaatgagtggaatggattccgcaaagcgcagctcatgatccga
gatttgcgtgtggaaggcgtgcaagtgtatgattggcgtgctctgcgcgatcttcaggaa
aaacttcaggtgcttcgcgcagaatccgtcccactgcttacttttcaagaagacaccgcc
gcccatttccaattggacgacgtgatgcgctacgaacccggcatgacgctctcagggcat
gtcgttgcattattagatcttcccgatgatgaagagcagttgtctgcattccttagtacg
catccgcagctcaaccgcttctattgcattttctatcactctcgtgatcattatttctcc
gcattcccggaacgcgatcactttgtttggtattacgcactaatccggcagcgtcatcgc
ttcgaactgcgcaacatgatgcggcaaattgccggttacaagggatggagcgaacaatcg
atttctttgatgacacaggtgttttttgaacttggttttgttaaaatagagaaaggcatt
ttatcagaaattccttcacctgcgaaagcgccgctgacttcctcggaactctaccgaaag
gaaaaagcgcagcgcgatttggaagcacggttttgttatgcaccgatcagcgaagtgaaa
cagtggctgattgtacaattgagacagagcgaaaagcaaggcatcaaatga
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integrated database retrieval system
