Sporolactobacillus terrae: C0679_10380
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Entry
C0679_10380 CDS
T05792
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stea
Sporolactobacillus terrae
Pathway
stea03030
DNA replication
stea03410
Base excision repair
stea03420
Nucleotide excision repair
stea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0679_10380
03410 Base excision repair
C0679_10380
03420 Nucleotide excision repair
C0679_10380
03440 Homologous recombination
C0679_10380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stea03032
]
C0679_10380
03400 DNA repair and recombination proteins [BR:
stea03400
]
C0679_10380
Enzymes [BR:
stea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0679_10380
DNA replication proteins [BR:
stea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C0679_10380
DNA repair and recombination proteins [BR:
stea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C0679_10380
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0679_10380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
WHD_BrxR
HHH
Motif
Other DBs
NCBI-ProteinID:
QAA25974
LinkDB
All DBs
Position
complement(2152798..2155428)
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLVLIDGNNVVYRAFFALPLLSNNQGMYTNAVYGFTMMLMRVIEEEKPTHLLVAFDAG
KTTFRHATYKEYKGGRQKTPPELSQQFPLVHELLDAMGIRRYELDNYEADDIVGTLAREA
SCNGFNVRIVTGDKDYLQLVDQGVRVSLIRKGITDTVDYDIEKVKERYGINPQEVIDLKG
LMGDASDNIPGVPGVGEKTAIKLLKQFQTVEGVYEHIEQVSGKKLKEKLETNKEQALLSK
KIATIDRESPLEITPDACSYTREFTSKLRDLFNELGFQSLLEKIDVAGSDESQTEKKDIA
VQTVTHFQSNQFVSPSALILQMLDENYHYADITGIAVSNKTGTYFIETQHALKDDAFREW
LEDPKMKKVLLDSKSAEVALKWRGLSLHGAAFDVRLAAYLIDPSEAGQDLALLANKRGIS
NVETDEAFYGKGAKQKIPEGNGQAQHLGKKAAALLQLEPKLIQELIENKQRELLFELELP
LAHVLAKMEYTGIKTSSETLKAMGGELDRTLEIIEHAIYSMAGVTFNINSPKQLGEILFE
KLQLPPIKKTKTGYSTAADVLEKLRGRHEIIDKILDYRQLGKLKSTYVEGLLKVIHPETG
RVHTVYNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFLPSEEGWQIFSADYSQIELR
VLAHIADDENLKQAFLENMDIHTKTAMDVFGVTENEVTPLMRRHAKAVNFGIIYGISDYG
LSQNLGITRKEAAQFIEQYLKSYPGVHHYMRTIVQKAKTDGYVTTLLNRRRYLPDINGRN
FNRRSFAERTAMNTPIQGSAADVIKQAMIHMDHRIQEEKLQTRMLLQVHDELIFEVPEHE
LGIMNRIVPEVMEHAIELRVPLKVECSYGPTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattagtcttaattgatggcaataatgttgtttatcgcgctttttttgcgctg
ccgctgttaagtaataatcaaggaatgtatacaaatgctgtatacggcttcacgatgatg
ctgatgcgcgtcattgaagaggaaaagccaacgcatttgcttgtcgctttcgatgcagga
aaaacaacatttcgccatgcaacgtacaaagaatataaaggcggccgccagaaaacacca
ccggaactgtctcaacaatttccgctcgttcacgaattgcttgatgctatgggtattcgg
cgctacgagctggataattatgaagcggacgatattgttggcacgcttgctcgagaggca
agctgcaatgggtttaatgtgcgcattgtgactggggataaggactatttgcagctggtc
gatcaaggcgtacgcgtgtcactgatccgtaaaggaatcactgatacggttgattatgat
attgagaaggtcaaggaaaggtatggaattaatcctcaagaagtcatcgaccttaaaggg
ctgatgggcgatgcttcggataatattcccggtgtgcccggagttggcgagaagacggca
atcaagctgttgaagcaatttcagaccgtcgaaggtgtctacgaacacattgaacaggta
tccggtaaaaaactgaaggaaaagctggaaaccaataaagaacaagcactgttgagtaag
aaaatcgcaaccattgacagagagtcgccgcttgagattacgcccgatgcatgcagctat
acacgtgaatttacaagtaagttgagagatctatttaacgaactgggctttcaatcactg
cttgaaaaaattgatgttgccggttcggatgaatctcagaccgaaaagaaagacattgct
gtccaaacggttactcattttcaatcgaatcagtttgtctctccgagtgcattgattctc
caaatgcttgatgagaactatcactatgcagacatcaccggaatcgctgtttcgaataaa
accggtacctattttattgaaacacaacacgcccttaaggatgacgcgtttcgagaatgg
ctagaagatccaaaaatgaagaaggtgctgcttgatagcaaatcagcagaagttgcctta
aaatggcgcgggttaagcttgcacggcgcagcgtttgatgttcggcttgctgcttatctg
atcgacccatcagaagcggggcaggatctggctcttttggcgaataaacgcggcatcagc
aatgtcgaaaccgatgaagccttctatggaaagggtgcaaaacagaaaattcctgaaggg
aacggacaggcgcagcatttgggcaaaaaagcggccgcattgctgcagcttgaaccgaaa
ttaattcaggagcttattgaaaacaagcagagggagctgctttttgaactggaactaccg
ctggctcatgtgctggctaaaatggaatatacggggataaaaacaagcagtgaaacattg
aaagcaatgggcggagaacttgatcgtacgcttgaaattatagaacatgctatttattca
atggctggtgtgacgtttaacattaattcaccgaagcagcttggcgaaattctattcgaa
aaattgcagctaccaccaattaaaaagacgaaaacaggctactcgactgcggccgatgtt
cttgagaaactgcgtggccgccatgagatcattgataagattcttgattaccggcaactt
ggcaaattaaaatccacttatgttgagggattgcttaaagttatccatccggaaaccgga
cgcgtgcataccgtctacaatcaggcattgacgcaaaccggccgactgagttcaacagat
ccgaacttgcagaatatcccgattcgacttgaagaaggtcgcaagattcgcaaagcgttt
cttccaagtgaagaaggctggcagattttttccgccgattactcgcaaatcgaacttcgt
gtgctcgcacatattgccgacgatgaaaacctgaaacaggcgtttcttgaaaatatggat
attcacacaaaaacagcaatggatgtttttggtgtaaccgaaaatgaagtgacaccgttg
atgaggcgccatgcgaaagccgttaatttcggcatcatctatgggatcagcgactatgga
ctatcgcagaatcttgggattacgcgtaaagaagcggcacaatttatcgagcaatactta
aagagctatccgggggttcatcactatatgagaaccatcgttcaaaaggcgaaaacagat
gggtatgtgaccaccctgttgaaccgtcgccgctacttgccggatattaacggtcgcaat
ttcaatcgacgcagtttcgccgaacgaacggcgatgaatacgccgattcagggcagcgcc
gccgatgtgatcaagcaagcgatgattcatatggatcatcggattcaagaagaaaaattg
caaacccggatgctgctacaggtgcacgatgaattgattttcgaggtcccggaacacgaa
ctcggtatcatgaatcgcattgttcctgaagtgatggagcatgccattgaacttcgcgtg
ccactgaaagtcgagtgctcatacggaccgacgtggtacgatgcaaaataa
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