Sporolactobacillus terrae: C0679_10660
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Entry
C0679_10660 CDS
T05792
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
stea
Sporolactobacillus terrae
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stea03016
]
C0679_10660
Enzymes [BR:
stea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C0679_10660
Transfer RNA biogenesis [BR:
stea03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C0679_10660
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Polysacc_deac_3
HVSL
Motif
Other DBs
NCBI-ProteinID:
QAA26027
LinkDB
All DBs
Position
complement(2215515..2216105)
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AA seq
196 aa
AA seq
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MGRRRFMSNHYFLGIPVADALRETLNQAARSYLTAADYKRKTDARDYHITLLFLGALASE
QRTAIVQAVHQTSANWTPFTLALSGIDGFGDRRHPRVLFASLKETRGLTGLQAAIAQAVA
PLGVRLENRPYHPHITLAKRWVSGDLPMQLPAVHHGLAGKQWTVSAVSLFQVCPDNLPNY
QQICLFPFQSEKREYS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaggcgttttatgtccaatcattattttttaggcattcctgttgcggatgca
ttacgggaaacgttaaatcaggctgctcgctcatatcttacagctgcagactataagcgt
aaaaccgacgcccgcgattaccatattacgctcctctttttgggcgcactggcttccgag
cagcgtacggcaattgtacaagccgtacaccaaacttcggcgaactggacgccatttacg
ctcgctttgtcaggaatcgatgggtttggtgatcgcaggcacccgcgcgttttatttgct
tcattaaaggaaacaagaggtctcactggtcttcaagctgcaattgcgcaagccgtggct
ccgctcggcgtgcgattagagaatcgcccgtaccatccgcatatcacactggcgaaacgc
tgggtaagcggcgaccttccgatgcagttgcctgcggtgcatcatgggctcgctggaaaa
cagtggaccgtatccgctgtatcgctttttcaagtttgtccggataatttgccgaattat
caacagatatgcttatttccttttcaatctgaaaagagagagtattcctaa
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