Sporolactobacillus terrae: C0679_12855
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Entry
C0679_12855 CDS
T05792
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
stea
Sporolactobacillus terrae
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stea03009
]
C0679_12855
Enzymes [BR:
stea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C0679_12855
Ribosome biogenesis [BR:
stea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C0679_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Methyltransf_15
PrmA
Cons_hypoth95
Methyltransf_11
Methyltransf_12
N6_N4_Mtase
RrnaAD
Methyltransf_32
TPMT
Methyltransf_23
UPF0020
PCMT
Motif
Other DBs
NCBI-ProteinID:
QAA26386
LinkDB
All DBs
Position
complement(2665541..2666914)
Genome browser
AA seq
457 aa
AA seq
DB search
MAAFNIPVQKNQQLEVTFNDLTQDGSAVAKVDGYTLFIPGGLPGEKAKIQVIKTKKGYGY
GRLIERIETSDRRAEAPCPYYPQCGGCSIQHISAAGQLAYKREIVQSALERIGGLSAIPV
EPTLGMDEPWNYRNKIQVPVAIQNGKFAFGFYKKRSHEIVTMDHCMITDPLIDEIVQSAR
KIAEEHHIMPYDEAKHRGVLRHVMARVGKKTGEVMVVFVTRGEELPHRKTLIKVLTERYP
QIKSIAQNINTKRTNAIFGNETKTLWGRDTIYDQIGDVTFAISARSFFQVNPTQTDVLYG
KALEYAGLTGKETVIDAYCGIGTISLFLAKQAKHVYGVEIVPEAIEDARKNAELNKITNA
TFEAGKSEDVIPKWRDQGIEPDVIVVDPPRKGCDASLIDTMIAMQPQRIVYVSCNPATLA
RDLKLLTAGGFEIKKVQPVDMFPQTMHVELVVQLILK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcagcattcaatatacctgtacaaaaaaatcaacagcttgaagtcaccttcaacgac
ctgactcaagacggttccgccgtggccaaggtcgacggttatacactatttattcccggt
ggactgcctggcgaaaaagcaaaaattcaagtcatcaaaacgaaaaaaggttacggttac
ggtcgcttgatcgaacggattgagacaagtgatcgccgcgcagaagcaccatgcccatac
tatccgcaatgcggcggctgctccattcaacatatcagcgccgcgggtcagcttgcctac
aaacgggaaatcgttcagagcgctttggaacggattggcggactatccgctatcccagtt
gaaccaacgcttggcatggacgaaccgtggaattaccgcaacaaaattcaagtaccggtc
gccatacaaaacggcaaattcgccttcggtttttacaaaaagcgcagccacgagatcgtc
accatggatcactgcatgatcaccgatccactgatcgatgaaatcgtacaatctgcacgc
aagatcgctgaagaacatcacatcatgccctacgacgaagccaagcatcgcggcgtgctg
cgccatgtcatggcacgcgttggcaagaaaaccggcgaagtgatggtcgtctttgtcacg
cgcggtgaagaactcccgcaccgcaaaacgctgattaaggtactcactgagcgctatccg
cagatcaagtcgattgcccaaaatatcaatacaaagcgcaccaacgcgattttcggcaac
gaaacgaaaacactctggggccgtgacacgatctacgaccaaattggcgacgtcactttt
gccatttcggcgcgatcatttttccaggttaaccctactcagaccgacgtcctttacggg
aaagccttggaatatgccggactgaccggaaaagaaacggtaatcgatgcctattgtggt
attggcacgatttccctgttccttgccaaacaggccaaacacgtctatggcgtcgaaatc
gttcccgaagcgatcgaggacgcgcggaaaaatgctgaactcaacaagattaccaacgcc
acctttgaggcgggaaaatcagaagacgtcatccccaaatggcgcgaccaaggcattgaa
ccggatgtcattgtcgttgatccgccacgcaaaggctgtgacgcctcactgatcgacaca
atgatcgccatgcagccgcagcggatcgtctatgtctcctgcaacccggcaacgctcgca
cgcgatctgaaactgctgacagcaggtggattcgagatcaaaaaagtgcagcctgtggat
atgtttccgcagacgatgcatgtggagttggtggtgcaactcattttaaaatag
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