Sporolactobacillus terrae: C0679_14580
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Entry
C0679_14580 CDS
T05792
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stea
Sporolactobacillus terrae
Pathway
stea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0679_14580 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stea03019
]
C0679_14580 (recQ)
03400 DNA repair and recombination proteins [BR:
stea03400
]
C0679_14580 (recQ)
Enzymes [BR:
stea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0679_14580 (recQ)
Messenger RNA biogenesis [BR:
stea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0679_14580 (recQ)
DNA repair and recombination proteins [BR:
stea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C0679_14580 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QAA26692
LinkDB
All DBs
Position
complement(3003064..3004848)
Genome browser
AA seq
594 aa
AA seq
DB search
MDDAAHRALKKYFGYDEFRRGQDQIITRLLDGDDTIGIMPTGGGKSLCYQIPALLFPGVT
LVISPLISLMKDQVDALGNAGIQATFINSSLSFTEGKERLTAAARGKYKLVYIAPERLEV
PDFVRALERMKVSLVAIDEAHCISQWGHDFRPSYRSIPAMITRFSQKPVVVALTATATPN
VTADICQLLGIAQDHVIATGFARDNLNFQVIRGQSADVFLFDYLKKNQDQPGIVYAATRK
EVDRLSARLAEKGLAVGRYHAGLSEQERAMSQERFLYDDLTVLVATNAFGMGINKSNVRF
VIHYNMPRNIEAYYQEAGRAGRDGEKSDCILLFSPQDIRLQKFFIDQSEMDDALKHAEYH
KLEQMIGYCHTETCLQGYILRYFGDKDPDNCGHCGNCLDTREQSDVTIEAQKVLSCVKRL
RERYGKMMVAKVLAGASDQKVKTFHLNRLSTYGIMQEQTQKQISEFIDFLTAEQYLVQQG
GAYPVLALSDRSLAVLKGEAKVYKKGSVRAERLAVDDALFETLKQVRKALAQKEYVPPYI
IFSDQSLREMSARLPSTDHEFLMIKGVGQQKLEKYGQAFMKAIAEYQEAQQEPV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcagcgcaccgagccttgaaaaaatattttggctatgatgagttccgcaga
ggtcaagatcaaatcattacgcgcttgcttgacggcgacgacacgattggcattatgccg
acgggcggcggaaaatcgctttgttaccagattccggcactgcttttccccggcgttacc
cttgtcatttcaccactgatttctttaatgaaggatcaggttgatgcgcttggcaatgcc
ggcatccaagcaaccttcatcaacagctcactcagcttcactgaaggaaaagagcgcctg
acagcggctgcccgcggcaagtataaactggtctacatcgctccagaacgattagaggtt
cctgattttgtacgggctctggaacggatgaaggtttctctggttgctatcgatgaggcg
cactgcatctcgcaatggggacatgacttccggccaagctatcgctcgattccagcgatg
atcacgcgcttttctcagaaaccggtggttgtcgcactgaccgcaacggcgacgccgaat
gtcaccgcagatatttgtcagcttctggggattgcgcaggatcacgtgatcgctactggc
tttgcccgtgacaatctgaactttcaagtgattcgtggacaaagtgcggatgtctttctt
ttcgactatctgaagaaaaatcaggatcagccgggcattgtttatgctgcaacccgcaaa
gaggttgaccgcttatctgcgcgccttgcggagaaaggactggcagtcggtcgctatcat
gctggattatcggaacaggaacgggcgatgagtcaagaacgttttctctatgatgatctg
acggtccttgttgcgacgaatgcgtttggtatggggattaataaaagcaatgtacgcttt
gtgattcactacaatatgccgcgcaatattgaggcctattaccaggaggcagggcgtgcc
ggacgcgatggagaaaagagcgattgcatcctgttgttttcgccacaggacattcggctg
cagaaattcttcatcgatcaatctgagatggatgatgcattgaaacatgcggagtaccat
aagctggagcagatgatcggttattgccacacagaaacgtgtttgcaaggttacatattg
cgctatttcggagataaagatccagacaattgcgggcattgcggcaactgcttggataca
cgtgaacaatccgatgtaacgattgaagcccaaaaagtactgtcgtgtgtcaagcggctg
cgcgaacgttatggcaagatgatggttgccaaggtactcgccggtgcatcggatcaaaag
gtgaagacatttcatctgaatcggctctcaacctatggcatcatgcaggagcaaacgcag
aagcagatcagtgaattcatcgattttctgactgccgagcagtatcttgtgcagcaaggc
ggtgcttatccggtgctcgcactgagcgatcgctcgctcgctgttttaaaaggcgaagca
aaggtgtataaaaagggcagcgtacgtgcggaacgtcttgctgtggacgatgcactcttt
gaaactttgaaacaagtacgcaaggcactggctcagaaagaatatgtgccgccctatatt
attttctctgatcagtctttgcgcgaaatgagcgcacggctcccctcaacggaccatgaa
ttcctaatgatcaaaggcgttggccagcagaagctggaaaaatacggacaagcctttatg
aaggcgattgctgagtatcaggaggcgcagcaggaaccggtatga
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