Sporomusa termitida: SPTER_09790
Help
Entry
SPTER_09790 CDS
T06115
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sted
Sporomusa termitida
Pathway
sted00061
Fatty acid biosynthesis
sted00071
Fatty acid degradation
sted01100
Metabolic pathways
sted01212
Fatty acid metabolism
sted02024
Quorum sensing
sted04146
Peroxisome
Module
sted_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPTER_09790 (lcfB_1)
00071 Fatty acid degradation
SPTER_09790 (lcfB_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPTER_09790 (lcfB_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPTER_09790 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sted01004
]
SPTER_09790 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sted04147
]
SPTER_09790 (lcfB_1)
Enzymes [BR:
sted01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPTER_09790 (lcfB_1)
Lipid biosynthesis proteins [BR:
sted01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPTER_09790 (lcfB_1)
Exosome [BR:
sted04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPTER_09790 (lcfB_1)
Exosomal proteins of breast cancer cells
SPTER_09790 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDR79689
UniProt:
A0A517DQP9
LinkDB
All DBs
Position
1081101..1082576
Genome browser
AA seq
491 aa
AA seq
DB search
MFVHNLIFQGAKDNTVFTGRDSVSYGRLQEQVEKYRNYLYAAGIRIGENVGLFARNSPEF
VYCYMAIVSLGAVVVPLNFQLTAREIAFIVKDAQMKKLVTMEHLAVDTELSQQNYRQTVT
QLVIPVLKQRLAYEHLPAAPVDDSSLNADSPCAVIYTSGTTGCPKGAVLTHNNLIANASA
FREMLPITADDNVLCVLPMYHCFAWTCAVLNALLCGAAITILEAFAPKETIAAVKEYKVT
VAYGVPPMYNLLTRIGEAGDFAGVKYLISGGASLPEKVARQFAEKYGLQILEGYGLSEAS
PVVALNPVHQPKYCSIGKALPGLEVKVVDADGQELPPGEVGEIIVKGPSVMQGYFNLPAE
SAAALKDGWLYTGDLACRDKEGYFFVVDRLKDLIIANGENIYPREIEELLYSFPGIAEAS
VIGAADELRGQVALAYVVIQEGYNFDKKAVREYLQTNIAAYKIPRDFIIVDALLKNQTGK
ILKRVLRDQTQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgttcataatcttatttttcagggcgcaaaagacaataccgtatttaccggcaga
gacagtgtgtcctatggccggttgcaggaacaggtagagaaataccgtaattatttgtat
gcggccggtatccgtataggagaaaatgttggcctgttcgcccgcaattcaccggagttt
gtgtattgttatatggcgattgtcagtcttggtgccgttgttgtcccgcttaattttcag
ctgactgcccgggaaattgcttttattgttaaggatgcacagatgaaaaagctggttact
atggaacacctggctgttgacactgaactcagtcagcaaaactaccggcagactgttacc
cagcttgtcataccggtattaaaacagcggctggcctatgaacacctaccggctgctccg
gttgacgacagcagtcttaatgcagacagcccctgtgccgttatctatacctccggcacg
acaggatgtccgaaaggtgctgttttgacccataataaccttattgccaatgccagtgcg
ttccgggagatgctgccgattactgctgacgataatgtattgtgcgtgctgcccatgtac
cactgttttgcctggacctgtgctgttcttaacgctttgctctgtggtgcggccattaca
atcctggaggcttttgcgccgaaagaaaccattgccgccgttaaagagtacaaggtaacg
gttgcctatggtgtgccgccaatgtataacctccttacccggattggtgaagcgggtgat
tttgccggtgttaaatatttaatttccggtggcgcttcgctgccggagaaagtagcccgg
cagtttgcggagaaatatggcttgcagattctggaaggctatggcttgtctgaggcttcg
ccggtagtcgctcttaaccctgtgcaccagcctaaatactgctccattggcaaggcgctc
cccggcctggaggttaaagtggtcgatgctgacgggcaggagctgccgccgggtgaggtt
ggcgagattattgtcaaagggccaagtgttatgcagggctatttcaacctgccggccgag
agtgcagcggcgcttaaagacggttggctctataccggcgatctggcttgccgggataag
gagggatatttttttgttgttgacagattaaaggaccttattatcgccaacggtgaaaac
atatatccgcgcgaaattgaggaactgctgtactcttttcctggcattgcggaggccagt
gtgattggtgcggctgatgaattgcgtggtcaggtggcactggcttatgtagtcattcag
gaagggtacaattttgataaaaaggcagtaagggaatatctgcagaccaacattgccgct
tataaaataccacgggattttatcattgttgacgccctgctcaaaaatcagacaggcaag
atcttaaagcgtgtgttgcgtgaccagacgcaataa
DBGET
integrated database retrieval system
