Sporomusa termitida: SPTER_11890
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Entry
SPTER_11890 CDS
T06115
Symbol
ykoD_2
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
sted
Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sted02000
]
SPTER_11890 (ykoD_2)
Transporters [BR:
sted02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
SPTER_11890 (ykoD_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_18
AAA_13
AAA_22
AAA_30
Mg_chelatase
PRK
nSTAND3
MeaB
AAA_25
AAA_16
RsgA_GTPase
SbcC_Walker_B
AAA_23
Rad17
TsaE
nSTAND1
AAA_5
Thymidylate_kin
AAA_7
PduV-EutP
DUF463
Motif
Other DBs
NCBI-ProteinID:
QDR79887
UniProt:
A0A517DRE0
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All DBs
Position
1313225..1314697
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AA seq
490 aa
AA seq
DB search
MIEIKNVKFSYHGKRAESVSAIDLQINKGEFVLLCGRSGCGKTTVTRLLNGLIPHFYEGA
LHGEAFIDGKSIRNMKLHQLARLVGSVFQDPRSQFFTVDTTSEIVFGCENMGVPRAEMIH
RLNNTVAVMKIEQLLERSLFKLSSGEKQKIAIASVHAAGPSVYVLDEPSANLDHQATEEL
RVLLGLLKEKGHTVIIAEHRLYYLKDLVDRVVYMEGGKIAAEYDRENFLSMPDTERIDKG
LRCVFPAKLVLQRSGSEMFAPPAYLQLDAVCFRYEGSPRILDGLCLKAGQGEIIGVTGLN
GAGKSTFAKILCGLVSEQQGKVSIESGPAKAGERLKKSYFVMQDADYQLFTESVEEELAL
GNENMPHLTETVAETMETLGLAAFKSCHPASLSGGQKQRVTIAVAIVKGADILIFDEPTS
GLDAENMRRVASLLQRVAAKGKAVFVITHDYEFIVHTCTRIVNLAGGRVSADFFLNDSSL
EELKELFGFI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagataaaaaatgtaaaattcagctatcacggaaaacgggccgaaagcgtttct
gccattgatttgcagattaacaaaggagaattcgttttgctgtgcggacgcagcggttgc
ggcaaaaccaccgttacccggttgctgaatggtttgattcctcatttttatgaaggggct
ttgcacggtgaggcctttattgacgggaaaagtatccgcaatatgaagctgcatcagctc
gcacggctggttggctcggtattccaggatccccgttcgcagttttttacggttgatacc
acgtcggaaattgtcttcggctgcgaaaatatgggcgtgccaagagcggaaatgatccac
cggctgaataatacggtggcggttatgaaaattgagcaactgctagaaaggagcctattc
aagttatccagcggcgaaaaacaaaaaattgccatcgcttccgtccatgcggcgggaccc
tctgtttatgtactggacgaaccttcggccaatttggatcatcaagctacggaagaactc
agagtacttcttggcctgctgaaggaaaagggccatacggtcattatcgccgagcaccgc
ctgtattacctgaaagaccttgtcgacagagtggtttatatggagggtgggaaaattgct
gcagagtatgaccgggaaaacttcctgtctatgcctgatacagagcggatagataaagga
ctaagatgtgttttcccggcaaagctggttttacagcggagcggcagcgaaatgtttgca
ccgccggcctatttgcagctggacgccgtatgtttccggtatgagggcagtccccggatt
ctcgacggattgtgccttaaggccggacagggagaaattattggcgttacaggcttgaac
ggcgccggcaaaagcacctttgcgaagattctctgcggactggtaagcgagcagcagggg
aaagtaagtattgagtctgggccggcaaaagcgggagagcgcctgaaaaaatcatacttt
gttatgcaggatgctgactatcaattatttactgaaagcgtagaggaagaactggctctg
ggcaacgagaacatgccccatttgacggaaacagtggcggaaacgatggaaacactcggt
ctggctgcctttaagagctgccatccggcctccctctctggcggacaaaagcaacgagtg
accattgccgtggcaatcgttaagggggcggacatattgatttttgatgaacccaccagc
ggtttggatgcggaaaatatgcggcgggtggcttccctgctgcaaagggttgcggccaag
ggaaaagcggtgtttgtcatcacccatgattatgagtttatcgtgcacacttgtacaaga
attgtcaatttggcgggaggtagagtcagtgctgattttttccttaatgacagcagtctg
gaagaattaaaagaactttttggttttatatga
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