Sporomusa termitida: SPTER_18710
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Entry
SPTER_18710 CDS
T06115
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sted
Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sted03016
]
SPTER_18710 (truB)
Enzymes [BR:
sted01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPTER_18710 (truB)
Transfer RNA biogenesis [BR:
sted03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPTER_18710 (truB)
Prokaryotic type
SPTER_18710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
SAWADEE
Motif
Other DBs
NCBI-ProteinID:
QDR80543
UniProt:
A0A517DT58
LinkDB
All DBs
Position
2013422..2014306
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AA seq
294 aa
AA seq
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MMQSGLINVLKPPGMTSHDVVAYIRRLYGLKRVGHAGTLDPAAAGVLPVFVGNATRLVEY
LADADKSYRAELTFGFETDTGDDTGQIIQSRPYNRPQLSQIEAALASFIGVSEQIPPMYS
AVKIAGKKLYELARAGQVVERKARTIVIEKLVLVTEAESGLVFDVKCSKGTYIRTLCADI
ARRLDCLAVMSFLVRTRVGSFCLEQSLTLEEITANKEQALQAADTALTHIPAVILSEQEA
QAVKNGRSICCRQSGADLVRMYDRQQNFLGIGRETGQSEERTMLIPVKILSPDR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaagtggtttaattaatgtccttaaaccgccaggcatgacatcccatgatgtg
gttgcctatattcggcgattatatggattaaaacgtgtcggccatgccgggacgttggac
ccggcggcggccggggttttaccggtatttgtcggtaacgccaccaggcttgttgaatat
ttggctgatgctgataaaagttatcgggctgagctcacttttggttttgaaacagacacc
ggcgatgataccggacagattattcagagccgtccgtacaaccggccgcagttgagtcaa
attgaggcagcgttagcttcatttattggtgtatctgagcaaattccgcctatgtactca
gcggtcaaaatcgctgggaaaaagttatatgaactggcccgtgccggccaggttgtggaa
cgaaaagcgcgtacaattgtcatcgagaagcttgtgcttgtaaccgaagcggaatctggc
cttgtttttgatgtaaaatgttccaagggcacttatatccgtacactgtgtgctgatatt
gcccgccgactagactgcctggcggtcatgagttttttggtcaggacgcgggtaggcagt
ttctgcttggaacaatcattaacactggaagagattaccgcgaataaggaacaggcgctg
caagctgccgatactgctcttactcatataccggctgttatcttgtcagagcaggaagca
caggcagtaaagaacggccgttccatctgctgccggcaaagcggtgctgatttagtaaga
atgtatgaccgccagcagaatttccttggcattggccgggaaacaggtcagagtgaagag
cggacaatgttgattccagtgaaaattttaagtccggaccgataa
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