Sporomusa termitida: SPTER_18740
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Entry
SPTER_18740 CDS
T06115
Symbol
pnp_1
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sted
Sporomusa termitida
Pathway
sted03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPTER_18740 (pnp_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sted03019
]
SPTER_18740 (pnp_1)
03016 Transfer RNA biogenesis [BR:
sted03016
]
SPTER_18740 (pnp_1)
Enzymes [BR:
sted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPTER_18740 (pnp_1)
Messenger RNA biogenesis [BR:
sted03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPTER_18740 (pnp_1)
Transfer RNA biogenesis [BR:
sted03016
]
Prokaryotic type
tRNA degradation factors
SPTER_18740 (pnp_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
QDR80546
UniProt:
A0A517DTD5
LinkDB
All DBs
Position
2015934..2018045
Genome browser
AA seq
703 aa
AA seq
DB search
MEKFQLELGGRTLIIESGKMAKQASGAVLVRYGDTAVLVAATQSAEPRQGIDFFPLTVDY
EERLYSVGKIPGGFIKREGRPSEAAILAGRLIDRPIRPLFADGLRNDVHVVATVMSVDQD
NPPDIAAMIGASCALGVSDIVFNGPIGGVRVGLLDNKFILNPTVAQQELSDLNLVVAGTK
EAILMVEAGARELSEETMLEAILFGHAAIKEIVAFQEAIIAKIGKPKKEKPLYEVPAEID
AAMREYVTADLKTAVANKDKLQREENIKQVKTDTVAHFLALYPEKDKDINYMFQKILKEI
VRKMITVDKIRPDGRQIEEVRPITCEVGLLARTHGSGLFTRGQTQVFTITTLGAIGDEQI
LDGLGVEESKRYMHHYNFPSFSVGETRPSRGPGRREIGHGALAERALLPVIPSEIEFPYT
IRLVSEVIESNGSTSMGSVCGSTLSLMDAGVPIKSPVSGVAMGLVKEGDHHTILTDIQGM
EDALGDMDFKVAGTAQGVTAMQMDMKISGITKEIFVDALAQAKRGRQHIMGKMLEVISEP
RTELSPFAPRIITMEIDPDKIRDVIGPGGKTIKKIIEETGVTIDIEDDGKVFIAAVDVAA
GQKAVHIIETLVRSVEVGTTYTGKVTRLMNFGAFVEILPGKEGLVHISQLARERVAKVED
VVKVGDEITVKVTEIDRQGRINLSRKELLKAEPREAAPQGTAQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccaattggaattaggcggccggaccctgatcatcgaatcagggaagatg
gctaagcaagcaagtggtgctgtgctggtgcgctatggcgacactgccgtactggtagct
gccacccaatcggctgaaccgcggcaaggtattgacttttttcccttaacagttgattat
gaagagcgtttgtattcagtggggaaaattcctggtggttttattaaacgggaaggtcgc
ccgagtgaagcggctattttagctggtcgtttaattgaccggcctattcggccgctgttt
gccgatggcctgcgcaatgatgttcatgtagtagctacagtaatgtcggtagatcaggat
aatcctcccgatattgccgccatgattggtgcatcctgcgccctgggtgtttctgatata
gtttttaacggaccgattggcggtgtacgggttgggttattagacaacaagtttattctg
aaccctacagtagcgcagcaggagctgagtgaccttaatttagttgttgccggcaccaag
gaggctattctgatggttgaagcaggcgccagggaactatcggaagagacaatgcttgag
gctattttatttggtcatgccgcaattaaagaaattgttgcttttcaggaagctattatt
gccaaaattggcaaacccaaaaaagagaaacccctgtatgaagttccggctgaaattgat
gcagctatgcgggaatatgtgacagctgacttaaaaacagcggtagctaataaagacaag
ctccagcgggaagagaatattaaacaggttaaaactgacacggttgcccatttccttgcc
ctttatcctgagaaggataaagatattaactatatgtttcaaaagatactcaaagagatt
gtccggaaaatgattaccgtcgataagattcgtcctgacggccgccagattgaagaggta
cgaccgattacctgtgaggttggactgttggcccgtacgcatggctccggcttgtttacc
cgcggacaaactcaggtttttacaattaccacgctcggtgccattggcgacgagcagatt
cttgacggccttggcgttgaggaatccaaacgctatatgcaccattataactttccctca
tttagtgtaggcgagaccaggccgtcacgtggtccggggcgccgtgaaatcggccatggc
gccttggctgaacgggcactgttgcctgtcattccttctgagattgagtttccctatacg
atccggctggtatcggaagtcatagaatccaatggttcaacctcgatgggcagtgtttgc
ggcagcaccttatcgcttatggatgcaggggttccaattaaatcgccggtgtccggggtt
gctatggggttagtcaaagagggtgatcaccataccatcctgacagatattcaaggcatg
gaagatgcgctgggcgatatggactttaaggttgcgggcactgctcagggtgtgacagcg
atgcagatggatatgaaaatatccggtattaccaaagagatttttgtagatgcactggcc
caggccaaacgaggccgtcagcatatcatgggtaaaatgcttgaggtcatcagcgagccc
cgcacagaattgtcaccttttgccccccgcatcataaccatggagattgaccccgataaa
atccgggatgtcattggaccaggcgggaaaacgattaagaagattattgaagaaaccggt
gttacgattgatattgaggatgacggcaaagtatttatcgctgctgttgatgttgctgcc
ggccagaaagcagtacatatcattgaaacgctggtccggagtgtggaagtgggtactacc
tacaccggcaaggttacccgattaatgaattttggggcctttgttgagatccttcccggc
aaagaggggcttgttcacatctcacagctggcccgtgaacgggtggccaaagttgaggat
gttgtcaaagtaggcgatgaaataacggttaaagtaactgaaattgaccggcagggccgt
attaacctatcccggaaagaactgttaaaagcagaaccgcgggaagctgctccgcaagga
acagctcagtaa
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