Sporomusa termitida: SPTER_22600
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Entry
SPTER_22600 CDS
T06115
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sted
Sporomusa termitida
Pathway
sted02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPTER_22600 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sted03021
]
SPTER_22600 (sigA)
Transcription machinery [BR:
sted03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPTER_22600 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QDR80917
UniProt:
A0A517DU95
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All DBs
Position
complement(2382871..2383977)
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AA seq
368 aa
AA seq
DB search
MADKKSTSGEQVNELLHKGKKRGVLTYSEIMDTMQTEDMSPDEIDDMYEIFSNKGIEIVD
EVPDVELIEGPDLSEIESTAEEVDIDLTIPEGISIDDPVRMYLKEIGRVPLLTADEEIKL
AKRMEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYNKG
YKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPSPEEVA
KAMDVSVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDQDAPAPAEAASFMLLKEQL
EEVLETLTPREEKVLRLRFGLDDGRARTLEEVGQYFGVTRERIRQIEAKALRKLRHPSRS
KKLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaaaagtacttcaggtgagcaagtcaatgaacttttacacaagggtaaa
aaacgtggtgtactcacgtattctgaaattatggataccatgcagactgaagatatgagc
cctgatgaaattgatgatatgtatgaaatttttagtaataaaggcattgagattgttgac
gaagttccggatgttgaactgattgaaggcccagacctgtctgagattgaatcgacggcc
gaagaagtagatatagatctcaccattcctgaaggcattagtattgatgaccctgtgcgc
atgtaccttaaagagataggccgggtaccacttttaactgctgacgaggagattaaactg
gccaaacgtatggagcaaggggatgaggaggctaaacgccgtctggctgaggcaaactta
aggctggtagtcagtattgccaaacgttatgttgggcgtggtatgctgtttttggatctg
attcaggaaggtaatcttggcttaatcaaagcagtggagaaatttgattataacaagggg
tataagttcagtacctatgctacctggtggattcggcaagcaataacccgggcaattgct
gaccaggcccgaacgattcggattcctgttcacatggttgaaaccattaataaactcatc
cgggtatcacggcagcttctccaggaattaggccgggagccatcaccggaagaggttgca
aaagctatggatgtcagcgtggaacgggtacgggagatcatgaaaatagcccaggaacct
gtatctttggagacgcccatcggtgaagaagaagactctcacctgggagattttatcgaa
gaccaggatgcaccggctccggccgaagctgcttcttttatgctgcttaaggaacagttg
gaagaagtcctggaaacactgacaccgcgcgaagaaaaggtattgcgcctgcgttttggt
ttagatgacggccgggcccggacgctggaagaagtgggacaatattttggtgttacccgc
gaacgtatccgtcagattgaagccaaagcgctcagaaaacttcgccatcccagccgtagt
aaaaagttaaaggattttctggagtaa
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