Sporomusa termitida: SPTER_23530
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Entry
SPTER_23530 CDS
T06115
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sted
Sporomusa termitida
Pathway
sted03030
DNA replication
sted03410
Base excision repair
sted03420
Nucleotide excision repair
sted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPTER_23530 (polA)
03410 Base excision repair
SPTER_23530 (polA)
03420 Nucleotide excision repair
SPTER_23530 (polA)
03440 Homologous recombination
SPTER_23530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sted03032
]
SPTER_23530 (polA)
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_23530 (polA)
Enzymes [BR:
sted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPTER_23530 (polA)
DNA replication proteins [BR:
sted03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPTER_23530 (polA)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPTER_23530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPTER_23530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QDR80999
UniProt:
A0A517DUH6
LinkDB
All DBs
Position
complement(2469851..2472493)
Genome browser
AA seq
880 aa
AA seq
DB search
MPQKLIIIDGSSLVHRAFHALPMLRTAGGLYTNAVYGFTTMLVKLLTDYKPDLLAVAFDK
GRVTFRTDTYQQYKAQRQATPCELSEQFPLIHELLGAFGIVTLEEQGFEADDILGTLAAK
AVKQGCEVLIVTGDRDALQLIGPGTTVLLTRKGISEMAVMDAAALKEKYGLTPAQFIDMK
GLMGDTSDNIPGVPGIGEKTAIKLLTQFGSMENVLANIEGVTGKKLQENLRQYAEQAVLS
KRLATIVCDMPLEFVPANFTINPDRDAVKAVFAKFEFKNMLAKFDVLFAGTIHADAAELA
AKTVELVAPVIVSSRSDIEALHLAARKQGNLCCYPLTAAHSPLAGLTGIALTCAGKTAYI
PATAEGWSAVFDILADSSITLTAYDAKQLYNACRLRGTAINCLVSDLLIAAYLLDPTAAS
YPLATLAEKYLGQTIVLPGGDKYLTTKPEFAVWAGGIIEQLRAAFADSLVNAGLDKLFAQ
VEMPLVEALSAMEITGIKVDRDYLQEMAVSIAGKVEQLLGEIYQLAGEEFNVNSTKQLGI
ILYEKLKLPIIKKTKTGYSTDAEVLEKLAGEHPLIDKLLEYRQLTKLKSTYLDGLEILIE
PATSRIHTTFNQTVTATGRLSSSEPNLQNIPIRTDIGRRIRELFIPGDGYQYIMAADYSQ
IELRVLAHMAGDASLLEAFRHNQDIHTRTAAEVFGIAMADVTAELRARAKAVNFGIVYGI
SDFGLARDIGVSRKEAGYYIESYFAKYQGVKRYIDEVVAGAHRDGYVTTLFGRRRQLPDI
NSSNFNQRSFAERTAMNTPIQGAAADIIKIAMNHVYQELKAAGLKSRLLLQVHDELVLEA
AADELDQVAKLVKNAMEQAVELSVPLLAEVKTGRNWAEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaaactaattatcattgacggcagcagtcttgtacatcgggcgtttcatgca
ctgccgatgctgcgtaccgcaggcggcctgtatacaaatgcagtatacggttttacgact
atgcttgtaaaattactgacagactacaaaccggatttactggctgttgcttttgataaa
ggccgggtgacgttccggacagatacttatcagcagtataaggcgcagcgccaggctacg
ccatgcgaattgtctgagcagtttcccctgatccatgagctgttaggggcgtttggcatc
gttactttggaagagcaggggtttgaggccgatgatattttaggtacacttgccgctaaa
gcggttaaacaagggtgcgaggtattaattgtcaccggggaccgggatgccctgcagtta
ataggtccgggcaccacggtgctgcttaccagaaaaggcatttctgagatggcggttatg
gatgcagccgcccttaaagaaaaatacgggttaaccccggcccagttcattgatatgaaa
ggcttaatgggggacacttccgataatatacccggagtacctggcattggtgaaaaaaca
gcaataaaattactgacacaatttggttctatggaaaacgtgctggctaatattgagggt
gtaaccggcaagaaattacaggaaaatctgcggcagtatgctgagcaggccgtattatcc
aagcgcctggcaaccattgtctgcgatatgccgctggaatttgtgccggcaaactttacg
attaaccctgacagagacgcagtaaaagcggtatttgccaagtttgagtttaaaaatatg
ctggctaagtttgatgttttgtttgccggcaccattcatgctgacgcagcggagttggcg
gcaaagactgttgagcttgtggctccggtcattgtttccagccgcagtgacattgaggcc
ctccatctggctgcccgcaagcagggtaatctatgctgctatccgttaacggccgcccat
tcgcctttagccggtttgacaggtattgctcttacctgtgccggcaaaactgcatacatt
ccggcaacggcagaagggtggagtgctgtttttgacatcctggctgacagcagtattacc
cttactgcctatgatgccaagcagctgtataatgcctgccggctgaggggaacagcaata
aactgcttggtgtctgatctgctgattgctgcgtatttgcttgatcccacggctgcttcc
tatccgctggccactctggctgaaaaatatttgggccagacaattgttttacccggcggt
gataaatatttaacaactaaaccggaatttgcggtttgggccggtggtattattgaacaa
ctacgggctgccttcgccgacagcctggtcaatgccggcctggacaagctgtttgcgcaa
gtggaaatgccgcttgttgaagcgttgtcggccatggagattaccggtattaaggttgac
cgggattatctgcaagagatggcggttagtattgccggtaaggttgaacagttactgggt
gagatttatcaattagccggtgaagagtttaatgttaactcaaccaaacaattggggatt
attttgtatgaaaaactgaagctgcctattattaaaaagacgaaaaccggttattctact
gacgctgaggtattggaaaaattagcgggggagcatcccctgattgacaagctgctggaa
tatcgtcagcttaccaagcttaaatctacttatcttgatggtttagaaatcctgattgag
cctgcgaccagcagaatacacaccaccttcaatcaaacagtgacagctaccggcagacta
agcagttcagagcctaatctgcagaatattcccatccgcacagatatcgggcgccggata
agagagctatttatacccggcgatggctaccaatatatcatggcggcagattattcccag
attgaactccgggttcttgctcacatggccggagatgccagcctgcttgaggccttccgg
cacaaccaggatattcacacccggacggcggccgaggtttttggcattgccatggcggat
gtaaccgcggagttaagagccagagccaaggctgttaactttgggattgtttatggcatc
agtgattttgggttggcgcgggacattggtgttagccggaaagaggccggctattatatt
gaaagttattttgccaaatatcagggggtaaaaagatatatagacgaggttgttgccggg
gctcaccgtgatggctatgtgaccacactttttggccggcggcggcagttgcctgatatt
aacagcagtaattttaatcagcggtcctttgccgaacggacggcaatgaatacccctatc
caaggggctgccgccgatatcatcaaaattgccatgaatcatgtttatcaggagcttaag
gccgccggactcaaaagcagactgctcttgcaggttcacgatgaacttgtgctggaagct
gctgccgatgagcttgaccaggtggccaagcttgtaaaaaatgccatggagcaggcggtg
gagctttcagtgccactcctggccgaagtgaagacaggacgtaactgggctgaagctaaa
tag
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