Sporomusa termitida: SPTER_23900
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Entry
SPTER_23900 CDS
T06115
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sted
Sporomusa termitida
Pathway
sted03030
DNA replication
sted03430
Mismatch repair
sted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPTER_23900 (dnaE)
03430 Mismatch repair
SPTER_23900 (dnaE)
03440 Homologous recombination
SPTER_23900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sted03032
]
SPTER_23900 (dnaE)
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_23900 (dnaE)
Enzymes [BR:
sted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPTER_23900 (dnaE)
DNA replication proteins [BR:
sted03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPTER_23900 (dnaE)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPTER_23900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDR81035
UniProt:
A0A517DUL1
LinkDB
All DBs
Position
complement(2507427..2510855)
Genome browser
AA seq
1142 aa
AA seq
DB search
MLNESGIKHGERIAFVHLHNHTEYSLLDGAGRISDLVRRAKELGMPAVAMTDHGTMYGTI
DFYKQAKKQGIKPIIGCEVYIAPRSRFDKAAVEGEAYYHLILLAANEQGYRNLIELVSRG
YSEGFYYKPRIDREILRSYSAGLIGLSACIAGEIPAAILRGDLAKAEALAVEYREIFGAE
NFYIELQDHGMPEEKQANQHLVKLAKQLGLGLVATNDAHYINKEDAECHDVLLCIQTGKT
VDDQVRMKFPSDEFYLKSPAEMAELFAAYPEALANTCKIAERCEVAFDFDKLYLPDFPTP
AGISDEEYLTQLCREAVSKRYPEPTPAIHARLDYELGVIKKMGYASYFLIVWDFVNYSRS
QAIPVGPGRGSAAGSIVAYLLAITNIDPLKYGLLFERFLNPERVSMPDIDIDFCYERRSK
IIEYVVERYGSDRVAQIITFGTMAARAAIRDVGRALNLPYGEVDRIAKLVPAELGITLKK
ALAANQELKGLYDTEATVRKLVDLAMALEGLPRHASTHAAGLVIAREPLTHFAPLQVSSD
GFVTTQFDKDRVEEIGLLKMDLLGLRTLTVIGDAIALIKENRGEELDIEQIPLEDTKTCV
MLSAGDTSGVFQMESGGMTNLVRDLKPERFDDLIPLVALYRPGPLGSGMVSDFIDGRHGK
KTVTYLHPVLEPVLADTFGVILYQEQVMQIASVLAGFSLGQADLLRRAMGKKKHEVLAAQ
RESFLQGAAERGFDAKLAHEVFELMTHFADYGFNKSHSAAYALVAYQTAYLKAHYPQEFY
AALLTSVMGTNDKVGYYIEECRRRGIAVLPPDINASGRAFSVDGPAIRFGLAGVKNAGGN
ALESIIAARRQGGRFTSLVDFCARVDMRVVNKRVIESLIKAGAFDSLKARRSQLLAVLEQ
AVEVAGCRQKDAASGQLGLFGEDTLDCVNDVSLPDLPELPQEELLALEKEITGFFVTGHP
LDKYRTRLASLPGLGSLAEGQYADGQPIRVGGLIASAKRINTKNGSMMCFINLEDFTGQA
EIIVFPRIFEKTGRLLAPDLPVVVSGRLNIHEEGVKIMADDISPLSSAGAEVRITLRKEQ
ETPATLAALKKLLNKYTGSAAVYLHLVDSKRIIKTERDFWIEPTPAAFAAIEGLLGKGAV
TC
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgaatccggaataaaacatggcgagcgtatagcgtttgtccatctccacaat
catactgaatatagtctgttagacggggccgggcggattagcgacctggtacgccgggcg
aaggaactggggatgccggcggtggcgatgactgatcatggcacgatgtatggtaccatt
gatttttataaacaagccaaaaaacaggggattaagccaattatcggctgcgaggtctat
atcgccccccgctcccgttttgataaggccgccgtagagggcgaagcctattatcatctg
atcctgctggccgccaacgagcaggggtatcgtaacctgattgagctggtatcccgtggc
tatagcgaaggtttttattataaaccccgtatcgaccgggaaatactgcgcagctacagt
gccggtttaattggcttaagcgcctgtatcgccggtgaaataccggctgctatcctgcgg
ggggacctggcgaaagccgaggcgctggctgttgagtaccgtgagatattcggggccgag
aatttttatatcgagctgcaggatcatggcatgcctgaggaaaaacaggccaaccaacac
ctggttaagctggcgaagcagctgggacttggtcttgttgccacaaatgacgcccattat
atcaacaaagaggatgcagaatgccatgatgtcctgctttgcatccagaccggcaagacc
gttgacgatcaggtgcggatgaaatttcccagtgatgagttttatctgaaaagcccggcg
gaaatggcggagttgtttgccgcctacccggaagcgctggctaatacctgtaaaattgcc
gagcgctgcgaggttgcctttgattttgacaagctttatctgcctgatttccccacgccg
gccggaataagtgacgaggaatacctgacacaattatgccgggaggctgtcagcaagcgc
tatcctgagccaacgccggcaatacatgcccggcttgattatgagcttggcgttataaaa
aagatgggctatgccagctattttctgatcgtctgggattttgtcaattactcccgcagt
caggcgattccggtagggccgggccggggttcggcggccggcagtattgttgcctatttg
ctggcgattaccaatattgacccgcttaaatatggcttgctgtttgaacggttcctgaac
ccggagcgggtatcgatgcctgatattgatatcgatttttgctatgaacggcggagcaaa
atcatcgaatatgttgtggaacggtatggcagcgaccgggtagctcagattattaccttc
ggtactatggccgcccgggccgctatccgcgatgtggggcgggcgttaaacctgccatac
ggcgaggttgaccggattgccaaactggtgccggccgaactgggcattaccctgaaaaaa
gcattagctgccaatcaggaactgaaaggcttatatgatacggaagctacggtacggaag
cttgttgacctggcgatggcgctggagggtctgccgcgtcatgcctcaacccatgcggcc
ggtctggtgattgccagggagccgctgactcacttcgcgcccctgcaggtatccagcgac
gggtttgtcactacccagtttgacaaagaccgggtagaggagattggcctcctgaaaatg
gacctgctgggactcagaaccctgactgttattggtgatgccattgctttaataaaagaa
aaccggggcgaagagcttgatattgagcagattccccttgaggacacgaaaacctgtgtg
atgctgtccgccggcgacacctccggtgtattccagatggagtcaggcggtatgaccaat
ctggtcagggatcttaaaccggagcggtttgacgatctgatcccgctagttgccctctac
cggcccgggccgctgggcagcggtatggtgtcggattttatcgacggccggcatggcaaa
aaaacagttacttatctgcacccggtgctggagccggttttagcagatacttttggtgtt
attttatatcaggagcaggttatgcagattgcctcggtgctggccggtttttccctgggt
caggccgatctcctgcgccgggcaatggggaaaaagaagcatgaagtgctggctgcccaa
cgggaatcttttttgcagggagcggcggagcgggggtttgacgccaagctggcgcatgag
gtttttgagcttatgacgcattttgccgactatggcttcaataaatcccatagtgccgcc
tatgcgctggtggcgtatcaaacagcctatctgaaggctcattatccccaggaattttac
gcggccctgttgaccagcgtaatggggaccaacgataaggtcggctattatattgaggaa
tgccggcgccggggaattgctgtgttgccgcctgacattaatgccagcggccgggccttt
tctgttgacggcccggccatccggttcggtttggccggggtaaagaatgccggcggcaat
gccctggagagcattattgccgcccggcggcagggcggcaggtttacctcccttgttgat
ttttgtgcccgtgtcgatatgcgggtggtaaataaacgggtgatcgagagtttaatcaaa
gccggggcctttgattcactgaaggcccggcggtcacaactactggcagttctggagcag
gcggtggaggtggccggctgccggcaaaaagatgcggccagcggccagctgggcttattt
ggcgaggacactctggactgtgtcaatgatgtaagtttgcctgatttaccggaattgccg
caggaagaattgctggcgctggaaaaagaaataaccggcttttttgtaaccggtcaccct
ttggataaataccgtaccaggcttgcttccctgcccggacttggcagtttagccgaaggt
cagtacgccgatggccagcccatccgggtcggggggctgatcgccagtgccaagcgcatt
aataccaaaaatggcagtatgatgtgttttattaatcttgaggattttaccggtcaggcg
gagattatcgtatttccccggatttttgaaaaaaccggccgcctgctggcgccggacttg
cctgtggtagtttccggccgccttaatatccatgaagaaggcgtcaaaatcatggctgat
gatataagcccgctgagcagcgccggggctgaggtcagaatcaccctgcgtaaagagcag
gaaacaccggccactctggccgcgcttaaaaagctgctgaataaatatacggggtcagcg
gctgtctatctgcatctggttgacagcaaacgcattatcaaaactgaacgggatttttgg
attgaaccgaccccggccgctttcgcggctattgaagggcttctgggcaaaggggcggtt
acctgttaa
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