Sporomusa termitida: SPTER_25080
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Entry
SPTER_25080 CDS
T06115
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
sted
Sporomusa termitida
Pathway
sted03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SPTER_25080 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_25080 (ku)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SPTER_25080 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6079_4th
Motif
Other DBs
NCBI-ProteinID:
QDR81135
UniProt:
A0A517DUV1
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All DBs
Position
2612398..2613264
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AA seq
288 aa
AA seq
DB search
MPRPMWSGSISFGLVNIPVKLYSAVKKKSIHFNQLRKSDGCRIRLKKICPSDGAEVPAEN
IVKGYEIAPDQYVVVTSNELEAIQPKNARTIAIEDFVDLGQIDPLYYDSCYYLTPDKGAG
KAYTLLLAAMIKTGKVAIARVVMRNKEYLTAIRPAGKALALSTMHFADEIIAAGQLEELA
IDVPEPDTRELAMAEQLIESLATGFQPDKYHNQYYQQVLEMLEKKAEGQTVTSQPEVKEG
GKVIDLMAALEASISAIKNKNDSGGKGAKQNKAAKPIAAPRRKKASAQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcccgatgtggagtggctcaatcagttttggccttgtcaatattcctgttaag
ttatacagcgccgttaaaaagaaatccattcacttcaatcaactgcgcaaatctgatggc
tgccgtatccgcctaaaaaaaatctgcccctccgacggggcggaagttcccgctgaaaat
attgttaaaggctatgaaatcgcccctgaccagtatgtagtggtgaccagcaatgaactg
gaagccattcagccgaaaaatgcccggacgatagcaattgaggattttgtcgaccttggt
caaattgaccccctgtactatgacagctgttattatcttacgccggacaagggggcgggt
aaagcctacaccctgctgctggccgctatgataaaaacaggtaaagtggcaattgcccgg
gtcgttatgcgcaacaaagaatatcttactgccatccggccggcaggaaaagcattggcc
ctatcgacaatgcattttgccgacgagatcattgcggccgggcaattagaagaactggct
atagatgtgcctgaacctgatacaagagagctggccatggccgaacaactcatagaatca
ttggctaccggatttcaaccagataaataccataaccaatattatcagcaagtcctggaa
atgctggagaaaaaggccgaaggccaaaccgtaaccagtcagccggaggttaaggaaggc
ggtaaagtaattgacctgatggctgcgctcgaggccagcatctccgcaattaagaataaa
aatgacagcggcggcaaaggggccaagcaaaataaggccgccaagcccatagcggccccc
agaaggaaaaaagccagtgcccagtaa
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