Sporomusa termitida: SPTER_33940
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Entry
SPTER_33940 CDS
T06115
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sted
Sporomusa termitida
Pathway
sted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPTER_33940 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_33940 (recD2)
Enzymes [BR:
sted01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SPTER_33940 (recD2)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPTER_33940 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PhoH
AAA_16
nSTAND3
AAA_22
AAA
Helicase_RecD
T2SSE
PIF1
AAA_28
ABC_tran
NTPase_1
TsaE
DEAD
UvrD-helicase
UvrD_C
TrwB_AAD_bind
HHH_2
AAA_5
NPHP3_N
Mg_chelatase
SRP54
SLFN-g3_helicase
CbiA
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QDR81974
UniProt:
A0A517DX86
LinkDB
All DBs
Position
complement(3540153..3542309)
Genome browser
AA seq
718 aa
AA seq
DB search
MDNKLEGLVENITFQATDGSFTVFRLKPDGEQGTVAVTGSFPAPLVGEQVALTGEWVEHS
RYGRQFKAGHCRRVAPTSLQGIERFLASGAIKGIGRAMAARLVAHFGERTLEVIELYPHR
LAEVEGIGDKKVEQIRKAYAEQAELKEVMLFLEMHGVTGAYGARIFACYGANSVAVLETD
PYRLAEEVKGIGFRTADQIALAVGFDRDHPSRLAAGVQFALLQTGLAGHCCVPEAMLTEE
TARLLNIDKADIAVVVSEQIKLGKLYTEDFHGMTLVYPRYLYRAERAVAERLLRLQAEAK
PIDGIDTDTLIDHWEAAGNMTLAAAQRQALAAALSHGVLVLTGGPGTGKTTTVRGILALL
EQQGGKIILGAPTGRAAKRLSETTGREAMTIHRLLEAGGGAGEEPVFARDEHNPLDADVV
IVDETSMMDMLLMSCFLQAVPDGCRVVLVGDVDQLPAVGPGSVLKDVIRSEAIPVVRLTE
VFRQAGESMIVLNAHRINRGRPPECGSPDFQFRELADSEGAAQAVVELCQTELAREGFDI
WREVQVLSPMHRQPCGVENLNRLLQAALNPAEGKEFIQGVNQVLREGDKVMQVRNNYSKK
VFNGDIGYIVAIADGKVLVRYPEDDVVYDKGEHDELTLAYAMSVHKSQGSEYPVVVMPLT
PGHHIMLQRNLLYTAVTRAKERVILIGTRAALNTAVLSDRTRRRYSLLAERLRGESLW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggataataaacttgaaggacttgttgaaaatataacatttcaggcgactgacggcagt
tttaccgtgtttcgcctgaagccagacggcgagcagggcacagtggctgttaccggcagt
ttcccggccccgctggtgggcgaacaggtggctctgaccggcgagtgggtggagcatagc
cgttatggccggcagtttaaagccggccactgccggcgggttgcccccacttccctgcag
gggattgaacggtttctggcctccggggcgatcaagggcattggccgggctatggcggcc
cggctggtggcccattttggcgagcggacgctggaggtcatcgagctttatccgcaccgg
ctggcggaagtggaaggtattggcgataagaaagtagagcaaatccgcaaggcgtatgcc
gaacaggccgaattgaaagaggtcatgttgtttttggagatgcatggcgtcaccggggcg
tatggggcccggatttttgcctgttacggcgccaattcggtggcggtgctggaaacagat
ccctaccggctggccgaggaggtaaagggcattggctttcgtacggccgatcagatcgcg
ctggcggtgggttttgaccgggaccatccgtcccggctggccgccggggtccagtttgct
ttactgcaaaccggactggccgggcattgctgtgtaccggaggcgatgctgaccgaggaa
acagcccggctgctcaatattgacaaggcggatatcgcggttgttgtcagtgaacagatc
aaacttggcaaactgtataccgaggatttccacgggatgactcttgtttatccccgctat
ttataccgggctgaacgggcggtggccgagcggctgctgcggctgcaggcggaggctaag
ccaattgacgggattgatacggatactttgattgatcactgggaagcggccggcaatatg
acattggcagccgcccagcgccaggcgctggcggccgcgctgtcccacggggtgctggta
ttgaccggcggccctggtaccgggaaaacgacaaccgtgcgcggcattctggccctctta
gagcagcagggcggtaaaattatcctcggggcgccgaccggccgggcggccaagcggctc
agtgaaacaaccgggcgcgaggcgatgaccatccaccgcctgctggaggccgggggaggg
gccggggaggagccggtctttgccagggatgagcacaatccgcttgatgccgatgtcgtt
attgttgatgaaacatcgatgatggatatgctgttgatgagctgcttcctgcaggcggtg
cctgacggctgcagggtagtactggtcggtgatgttgaccagctgccggcagtagggccg
ggctcagtcctgaaagatgttatccgttccgaagcgatcccggtggtgcggctgaccgag
gtattccggcaggccggtgaaagcatgattgtgcttaatgcccaccggattaaccggggc
cgcccgccggaatgcggcagcccggattttcagttccgtgagctggccgacagtgaaggg
gcggcccaggcggtggtcgagttatgtcaaactgagctggcccgggaagggtttgatatc
tggcgggaggtgcaggtcctatcaccgatgcaccgtcagccctgcggggtcgaaaacctt
aaccggctgctgcaggcggccttaaacccggccgagggcaaagaatttatccagggcgtc
aatcaggtgctgcgggaaggcgataaggttatgcaagtccgcaataattatagcaaaaag
gtatttaacggcgatatcggttacattgtggccattgccgacggcaaggtattggtgcgg
tacccggaggatgatgttgtctatgataagggcgaacatgatgaactgacgctggcttac
gccatgagcgttcataaaagccagggcagtgaatacccggttgtcgtgatgccgctgact
cccggccaccacattatgctgcagcgcaacctgctgtatacggcggtcacccgggccaaa
gagcgggttattctcatcggcacccgggccgccctcaatacggcagtgctgagtgaccgg
acccgccgccgctattcgctgctggctgaacgcctgcggggggaaagtttatggtaa
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