Sporomusa termitida: SPTER_40900
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Entry
SPTER_40900 CDS
T06115
Symbol
ybiT_2
Name
(GenBank) putative ABC transporter ATP-binding protein YbiT
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
sted
Sporomusa termitida
Pathway
sted02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPTER_40900 (ybiT_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sted02000
]
SPTER_40900 (ybiT_2)
01504 Antimicrobial resistance genes [BR:
sted01504
]
SPTER_40900 (ybiT_2)
Transporters [BR:
sted02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
SPTER_40900 (ybiT_2)
Antimicrobial resistance genes [BR:
sted01504
]
Gene variants
Macrolide resistance genes
Transporters
SPTER_40900 (ybiT_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_23
Dynamin_N
MMR_HSR1
AAA_15
nSTAND1
AAA
nSTAND6
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
QDR82661
UniProt:
A0A517DZ96
LinkDB
All DBs
Position
complement(4315733..4317211)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLISVTKLTFGYDGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLNLLLGKHEYSGT
IAAKVNFEYFPFPVTNPENNTIDVIENINPDCLPWQVMRELSLLQVAEDVVYRPFATLAN
GEQTKVLLATLFLKENSFLLIDEPTNHLDREARKAVSDYLQSKRGFILVSHDRAFLDNCV
DHILAINKTNIEIQKGTFSSWWANKKQQDSFELAENEKLRQDIARLSSAAKRTSDWSDKV
EKTKMGTRNSGLRPDRGYIGHKAEKMMKRSKAIEARQQAAVADKGKLLKNIESSERLKIS
QLGFHADRFIELENVAVFYGDKTACKSVSFTIEQGDRLALCGKNGSGKSSLIKLICGEDI
TYTGTFRKASQLKIAYVSQDTSYLSGSLTDYAREHAIEESLFKAILRKLDFSRVQFAKDM
AAFSGGQKKKVLIAKSLCEKAHLHIWDEPLNFIDVVSRLQIEELLLAYAPTILFVEHDTE
FCKNIATKIVEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaataagcgttacaaaactgacctttggctatgacggcagctatgataatata
tttgaaaacgtaagctttcaaattgatacagattggaaattaggcttcaccggccgaaat
ggccgaggcaaaactacatttctcaatctgctgcttggcaagcatgagtacagcgggacg
attgcggccaaagtaaacttcgaatactttcccttcccggtgaccaacccggaaaacaac
accattgatgtaattgagaatatcaatccggactgccttccctggcaggttatgcgcgag
ctatccttgctgcaggtggcagaggacgttgtataccgcccttttgctacccttgccaac
ggagagcaaacaaaggtgctgctggcaaccttgtttcttaaagagaatagtttcctgctg
attgacgagccgacgaaccaccttgacagggaggcgagaaaagctgtcagcgattatctc
caatctaaacggggcttcattttggtatctcatgaccgagcctttctggataactgcgtt
gaccatatccttgccattaacaaaacaaatattgaaattcaaaaagggactttttcgtcc
tggtgggcaaacaaaaagcagcaggacagttttgagcttgcggaaaatgaaaagctccgc
caggatattgcccgcttgtcttctgccgccaaacgtacctctgattggtcggataaagtg
gagaaaacaaagatgggtacaaggaattcaggcttaaggcccgatagaggttatataggc
cacaaggcggaaaagatgatgaaacgctctaaggccattgaagcaagacaacaagcggcg
gttgcggataagggcaagctgctcaaaaacatcgagagctctgagcggttaaaaatttcc
cagcttggttttcatgccgaccgatttatcgagcttgaaaatgtagctgtgttctatggt
gacaagacagcttgtaaaagcgtaagttttaccattgagcagggggacagactggctctc
tgcggtaaaaacggatcaggcaagtcgagtcttattaaactgatatgcggcgaggatatc
acctatacaggtactttccgcaaagcaagccagcttaaaatagcctatgtttcgcaggat
acttcttatcttagcggcagtttaaccgactatgccagagagcatgctattgaggaaagc
ttatttaaggctattttaagaaaacttgatttttccagagtacaatttgccaaggatatg
gctgcttttagtggcggacaaaagaaaaaggtactgattgcaaaaagcctgtgtgaaaaa
gcgcatttgcatatctgggatgaaccgcttaattttatcgatgttgtttcccgcctgcaa
atcgaagaattgctgcttgcctacgcgccaacaattctgtttgtagagcatgacactgaa
ttttgcaaaaatattgcaacaaagattgttgaattgtaa
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