Sporomusa termitida: SPTER_41460
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Entry
SPTER_41460 CDS
T06115
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sted
Sporomusa termitida
Pathway
sted00061
Fatty acid biosynthesis
sted00071
Fatty acid degradation
sted01100
Metabolic pathways
sted01212
Fatty acid metabolism
sted02024
Quorum sensing
sted04146
Peroxisome
Module
sted_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPTER_41460 (lcfB_2)
00071 Fatty acid degradation
SPTER_41460 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPTER_41460 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPTER_41460 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sted01004
]
SPTER_41460 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sted04147
]
SPTER_41460 (lcfB_2)
Enzymes [BR:
sted01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPTER_41460 (lcfB_2)
Lipid biosynthesis proteins [BR:
sted01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPTER_41460 (lcfB_2)
Exosome [BR:
sted04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPTER_41460 (lcfB_2)
Exosomal proteins of breast cancer cells
SPTER_41460 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
OmpA
Motif
Other DBs
NCBI-ProteinID:
QDR82716
UniProt:
A0A517DZN5
LinkDB
All DBs
Position
complement(4388707..4390323)
Genome browser
AA seq
538 aa
AA seq
DB search
MNIRPKIPFIPLEQQPYLKGRQLEFESIAQMLTVRANETPNAPHVYYYDQTLTYKDTNDQ
ANRVANYLQEQGVKKGDIIAVMIANSPAIYYAMWGAHKLGAIAMCIPTMLRGPEISYILD
DAKPKAAFVGSDYMTEFFKGVKEAGTKPIIVEAVTGNKYEPTIAQDTLVGILNKFSTDEC
LVKQKPEDIFLLLYSSGTTGRPKGVLLANKAGLSLCRDQNRSGIVTGNDVMLLILPMYHC
CPLCVFTYPMSYAGQALCIRQFSVNDFWPTVIKYGVTIIMAVPTMLDYILNRIDVKGVDL
SKVKIKYANTGAGPLSLETRKRLKELYNIDLLVGYGLTEGGGGCCVEPPLGRYKEGSCGM
SYPEQQIEIIDDHGNILPNNQIGEICIKGDNVMSGYLNKPEEYARAMTGGFLHTGDVGYF
DNEGYLFVTDRKGDMVVRGGENIYPREIENVLEANQLIAEVAVIGVPDKLLGERLKAFIV
PKVQGAMTAESIKAWLAERIADFKIPDYYEFLTALPRTATGKVQKFELRKRANSPGEN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgacctaaaataccatttattccattagagcaacagccttatcttaaagga
cggcaactggaatttgagagtattgcccaaatgcttactgtacgcgcaaatgaaactcca
aatgctccgcatgtatattactacgaccagacattaacttacaaagataccaatgatcag
gccaatagggttgcgaactatctccaagaacagggggtaaaaaaaggagatatcatcgct
gttatgatagcgaattctcccgcaatatactatgccatgtggggggctcataagctcggc
gcaattgcaatgtgtatccccaccatgctcagaggcccggaaatttcttatattttggat
gatgcaaaaccaaaggcagcttttgttggcagtgattacatgacggaattttttaaagga
gtaaaggaagctggaactaagccaattatcgtcgaggcagtgactggaaataagtatgag
ccaacaatagcacaggatactcttgtcggtattttaaataagttttcgaccgatgagtgc
ttggttaagcaaaagcctgaggatatatttttgttattgtattcatctggtacgaccgga
agacctaagggcgtattacttgccaataaggccggactgtcgttatgccgggatcaaaac
agaagcggaatcgtaaccggcaatgacgttatgctgcttattctgccgatgtatcactgt
tgcccattatgtgtgtttacctaccctatgagctatgctgggcaagctctctgtatccgc
caattttctgttaacgatttctggccaaccgttattaaatatggggtaacaattattatg
gctgttcctaccatgctggactatattctcaatcggattgatgtaaaaggtgttgattta
tccaaagtaaagattaagtacgccaatactggtgccggtcccctttcgcttgaaacgcgc
aaacggcttaaagaactgtataatattgatctcttggtgggctatggcctcaccgagggc
ggtggaggctgctgtgttgagccgcccctgggccgctataaggaaggatcgtgcggcatg
tcttatcctgaacagcaaattgagataatagacgaccatggtaatatactgcccaataac
caaattggtgaaatctgtataaaaggcgacaatgtaatgtcagggtacctaaataagcct
gaagaatatgcaagggctatgacgggtggctttttacacactggcgatgtaggctatttt
gataatgaaggctatctatttgtgacagaccgtaagggagatatggttgttcgtggtggg
gagaatatctatccccgggagatagagaacgtattagaagccaatcaactaatcgctgag
gttgctgttatcggcgttcctgacaagctgcttggcgagagactaaaagcgtttatagtt
cccaaagtgcagggagctatgaccgcagaatcaataaaagcgtggttggcggagcgaatt
gctgattttaaaattcctgattattacgaattcttaactgcgcttccccgtacggcaaca
ggcaaagtccaaaaattcgaattgaggaaaagagcaaactcaccgggagaaaactag
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