Sporomusa termitida: SPTER_46570
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Entry
SPTER_46570 CDS
T06115
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sted
Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_46570 (addB)
Enzymes [BR:
sted01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPTER_46570 (addB)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPTER_46570 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD_C_2
DUF6894
Motif
Other DBs
NCBI-ProteinID:
QDR83179
UniProt:
A0A517E0P4
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All DBs
Position
4946077..4949574
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AA seq
1165 aa
AA seq
DB search
MTLKLILGRAGYGKTWQCFDAVLSRLAESPDGRPLIFIVPEQATYEVERALASACPASGF
VRAYVLGFRRLAHRVLNETGGAVRPHISELGKRMVFRRLLMEHKASLRLLTRAAAEKSFA
ETIEGLVKECKTYKISPAMLAAAAEQERLDSPALAGKLHDVALLYQGFENFLAERYIDPE
DFLNLLAEKIPASGLLAQSEVWIDGFSWFTPQEYAVLEALLQAAASVTVTLCLDRPDNPF
NTREEALFHRQWQTYEKLKTTAAKLKVPVSQQELARPHRFEKRSLAAIEQNFFGGRKAGA
AGVRNNGSGFMLAEAANRRVEAEAIACEMIRLSREEGLRWRDMAVLIRDTDSYVELMTTV
LADYDIPFFSDGSRPAVHHPLAELVRSALELVLEKWSYEPVFRCLKTDLLPVTRDEVDIL
ENYCLEFGIRGSRWTSLEAWTFRRRFSLAEDEGAGDELSESGQAYLERVNHIRRQSTAAL
VQFTGRLLPAGRQGLPPVELAQAVYELLTGLQVPDTLETWAAAAERDGDLEQAREHRQIW
AKVVDLFDQIVDTFAEQPLTLADFAAIVGEGLEGTRLSLIPPSLDYVTIAALERTRRLNI
KAAFVPGASDGALPRRRREEGLLTDNERALLTRLGLELGGGAVADTFAEQFLVYTALTRA
SRWLWVSYSMADAEGKAQGPSPIVRRLKEITGNQVRALPVEPPPGQEAQYLARSERALAA
LACALRLYKQTGRISPAWWDVYNWALAKTSLRPQLAAALGGLFHYNQVERLPQNLSGRLY
LNNGVLRGSVTRFEAFRACPFKHFAQYGLGLKERAVYQLKAPDLGQFLHAVIKEFGDKLT
ASRQEWGDVTQPQISELCTGIVATLAPKLQNEILLSSKQHAHLVTRLTRRAVRSISRLVA
WARVSKFKPLALEQSFGRGPGALPPLTFPLPAGTLEVGGQIDRLDGGVLDGRQYALVIDY
KSGGAWLSLAEVYYGLKLQLLTYLLVAVSKRPGVNACLPAGVLYYFLKNPVVSGATLKSA
EQIEKEINGKLKMPGWLLADVNLAGLLDESLNGWSEFFKIALGKNGFYESCLDKLKTGEE
FTLLLAHVEQELVAVAEAILAGETAIRPYRLAKTTPCGYCAFRPVCQFDRNLPENDYLLL
PQLDDQTIMSELRQRKGGQSDAMLP
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttgactcttaaactaatcctgggccgggccggctatggcaagacctggcagtgttttgat
gctgttttatcccggctggccgaatcgcctgatggccggccgcttatttttattgtcccg
gaacaggctacctatgaggtcgagcgggctctggcttccgcctgcccggctagcgggttt
gtgcgggcctatgttctcggcttccgccggctggcccaccgggtgctgaatgagacgggg
ggggccgtcaggcctcatatttccgaactaggcaagcggatggtctttcgccgcctgtta
atggaacacaaagccagcctaagactgcttacccgggcggctgccgaaaaaagctttgcc
gaaaccattgaaggcttggttaaagagtgtaagacctataagatcagcccggctatgctg
gcggcggcggctgagcaggagcggctggacagtccggcgctggccggcaagctccacgat
gtagccctgctgtaccaggggtttgaaaattttttggccgaacggtatatcgaccccgag
gacttccttaaccttttggccgaaaagattcccgcatcagggcttttagctcagtctgag
gtgtggatcgacggctttagctggtttacgccccaggaatatgcagtcctggaggccttg
ctgcaagctgcggcaagtgttacggttaccctttgcctggaccggcctgacaatcccttt
aacacccgggaagaagcgctgtttcaccggcaatggcaaacatatgagaaattgaaaaca
acggccgcaaagctaaaggtgccggtaagtcagcaagaattagccaggccgcaccgtttt
gaaaaaaggtcgttagccgccattgaacagaatttctttggcgggcgtaaagccggggca
gcaggagtccggaataacggcagcggctttatgctggctgaggccgctaaccggcgggtt
gaagctgaggccattgcctgtgaaatgatcagattaagccgcgaagaaggcctgcggtgg
cgggatatggctgttttgattcgtgatacagacagttatgtcgaattgatgacaacagtc
ctggctgactatgatattccgtttttcagtgacggcagccggccggctgtgcaccatccc
ctggctgagcttgtgcggtcggcccttgagcttgtactggaaaaatggagctatgagccg
gtatttcgctgccttaaaaccgatttgctgccggtaacccgggatgaagttgatattctg
gaaaattactgtctggagtttggcattcgtggttcgcgctggacaagcctggaagcctgg
acatttcgccgccgcttttcgctggcagaggacgagggggccggtgatgaattaagtgag
tccgggcaggcgtatctggaacgggttaatcacattcgccgtcagagtacggccgcactg
gtacagtttaccggccggctgctgccggccgggcgtcaggggttgccgccggtggaattg
gcgcaggccgtttatgaactgttgacaggcttgcaggtaccggacacgctggagacctgg
gctgctgccgctgaacgggacggggacctggaacaggcccgtgaacaccggcaaatatgg
gccaaagtagtcgatttgtttgatcagattgtggatacttttgctgagcagccgttaaca
ctggcggattttgcggcgattgtcggcgaggggctggaagggaccaggctaagtctgatt
ccacccagtctggactatgtaaccattgccgcgctggaaagaaccaggcggcttaatatc
aaagccgcctttgtgccgggggcgagcgatggggcgctgccgcgccggcggcgggaagaa
ggcctgctgaccgataatgaaagggcgctgttgacccggctggggctggagcttggcggc
ggcgccgttgctgatacttttgcggagcagtttttggtctatacggccttaacccgggcc
agccgctggttgtgggtgagctattcaatggctgatgcagagggcaaagctcaggggccg
tcccccattgtacgccggcttaaagaaattaccggtaaccaagtgcgggcattgccggtt
gagccgccgcccgggcaggaggcgcaatatctggccagatccgaacgggcgctggcggcc
ctggcctgtgccctcaggctgtataagcagacaggccgtatcagtcctgcctggtgggat
gtctataactgggccttggctaaaaccagtctgcgtccacagctggctgccgccctggga
ggcttgtttcattataaccaggtcgaacggctgccgcagaatctctcaggccggctctac
ctgaataatggagtgctgcgcggcagtgtcacccggtttgaggcctttcgggcctgcccg
tttaagcattttgcccaatatggcctggggttaaaggagcgggctgtttatcagcttaaa
gcccctgatttaggccagttcctccatgccgtcattaaagagtttggtgataaactgacg
gcaagcaggcaggaatggggcgatgtgacacaaccccagatcagcgagctgtgcaccggt
attgtggccaccctggcccctaaactgcaaaatgagatcttgttaagcagcaagcagcat
gcccatttagtcaccaggctgacccggcgggctgtccggtccatcagccggctggtagcc
tgggcccgggtcagcaaatttaagccgttggcgttggaacaatccttcgggcgcggcccc
ggtgccttgccgccgttgacatttcccttaccggccggcaccttggaggtaggcggacag
attgaccggctggatgggggtgtgcttgacgggcggcagtatgcgctggtcattgattat
aaatccggcggcgcctggcttagcctggccgaggtctattatggtcttaagctgcagctt
ttaacctatctcctggttgccgtcagcaagcggccgggcgtaaatgcctgtctgccggcc
ggggtgctgtattacttcctgaagaatccggtggtgtccggagcaaccctgaagagcgcc
gagcaaattgaaaaagagatcaacggtaaactcaaaatgccgggctggctgctggctgat
gtcaacctggccggacttttggatgagtccttaaacggctggtccgagtttttcaagatt
gctttaggcaagaacggtttctatgaaagctgcctggacaaacttaagaccggggaagaa
tttaccctgttgctggctcatgttgaacaggagctggtggctgtggctgaggcgattctg
gcgggagaaacggcgatcaggccgtaccgtctggccaaaacgaccccgtgcggttattgt
gccttccggccggtctgccagtttgaccgaaatctgccggaaaacgactatctgctgttg
ccgcagttggatgatcagaccattatgagcgaactgcgccagcggaaaggaggccagagt
gatgcaatgctcccctga
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