Sporomusa termitida: SPTER_48230
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Entry
SPTER_48230 CDS
T06115
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sted
Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sted03032
]
SPTER_48230 (hup)
03036 Chromosome and associated proteins [BR:
sted03036
]
SPTER_48230 (hup)
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_48230 (hup)
DNA replication proteins [BR:
sted03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPTER_48230 (hup)
Chromosome and associated proteins [BR:
sted03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPTER_48230 (hup)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPTER_48230 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-HIG
HU-CCDC81_euk_2
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
QDR83339
UniProt:
A0A517E157
LinkDB
All DBs
Position
5130972..5131247
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTDLVKAVAQKADMTQKDAEKAINAVFASIEEALANDDKVQIIGFGTFEVKTREERKG
RNPQTGNEITIPASKNPVFKAGKGLKDTVNV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactgaccttgtaaaagcagtggctcaaaaggctgatatgactcaaaaagat
gccgagaaggctatcaacgcagtatttgcctcgattgaagaagctttagccaacgatgat
aaagtacaaataattggcttcggtacttttgaagtaaaaaccagggaagagcgcaaaggg
cgtaatcctcaaaccggcaatgaaattactatcccagcttcaaagaatccggtatttaaa
gccggcaaaggattgaaagataccgtaaacgtctaa
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