Streptomyces tendae: F3L20_03235
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Entry
F3L20_03235 CDS
T09112
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stee
Streptomyces tendae
Pathway
stee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F3L20_03235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stee03021
]
F3L20_03235
03400 DNA repair and recombination proteins [BR:
stee03400
]
F3L20_03235
Enzymes [BR:
stee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F3L20_03235
Transcription machinery [BR:
stee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F3L20_03235
DNA repair and recombination proteins [BR:
stee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F3L20_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QER85005
LinkDB
All DBs
Position
667886..671797
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGEMRDLKGE
GRSFASVAEAIMAFDAGELSLQSKIDIRFPVGTIPPRGWTPPVGEDGEPEGGSEWQQGDP
FRLNTTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKASGF
YWATRSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKDERTQELIAIWTKA
TNEVAEAMNDNFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFR
EGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLRLKI
AGRDADGVLRKAEDVETSVYARCLAEDIVVDGQVLAPAGTDLGDVLIEELVSRGVEEVKT
RSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG
DDITQGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKLVVTPDDGSDETAYPISK
RAKVLVSEGEHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKH
IEIIIRQMLRRVTIIESGDAELLPGELVERSKFEQENRRVVQEGGHPASGRPQLMGITKA
SLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVE
PTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgcgccaaggtacgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgagccgtctgggctacctgctcgacctg
gctcccaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgtcgtacccgcgacctgccctcgctggaggcccacgtctccgtcgagcgccag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagaccgat
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgtgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgcgccctgaagcggctgaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcg
ctcttcgacaacggtcgtcgtggccgcccggtgacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgcggagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgcccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagatgcgcgacctcaagggcgag
ggccgttccttcgcctcggtcgcggaggcgatcatggccttcgacgcgggcgagctgtcg
ctccagtcgaagatcgacatccgcttcccggtcggcactatcccgccgcgcggctggacc
ccgccggtgggcgaggacggcgagcccgagggcggctccgagtggcagcagggcgacccg
ttccgcctgaacaccaccctgggccgcgcgctcttcaacgagctgctgcccgaggactac
ccgttcgtcgactacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgcc
gagcgctacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggcttc
tactgggccacccgttccggtgtcaccgtggccatctccgacgtcgtcgttcccgaggcg
aagaaggagatcgtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgag
cgcggtctgatcaccaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcg
accaacgaggtcgccgaggcgatgaacgacaacttcccgaagaccaacccgatcttcatg
atggtgaactcgggtgcacgaggcaacatgatgcagatgcgtcagatcgccggtatgcgt
ggtctggtgtcgaacgcgaagaacgagacgatcccgcgtccgatcaaggcgtcgttccgt
gagggcctgtccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcg
gacaccgctctgcgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcc
caggacgtcatcatccgcgaggaggactgcggcaccgaccgcggtctgcgcctcaagatc
gcgggccgcgacgcggacggcgtgctgcgcaaggccgaggacgtcgagacgtccgtgtac
gcgcgctgcctcgccgaggacatcgtggtcgacggtcaggtgctggccccggccggcacc
gacctgggcgacgtcctcatcgaggagctcgtctcccgcggcgtcgaggaggtcaagacc
cgttcggtcctgacctgcgagtccgccgtcggcacctgcgcgatgtgctacggccgttcg
ctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtcc
atcggtgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggt
gacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaag
ggtgtcgccccgatctccgaggcctccggccgcgtgcggatcgaggagacggagaagacg
aagaagctcgtcgtcactccggacgacggcagcgacgagacggcgtacccgatctcgaag
cgcgccaaggttctggtctccgagggcgagcacgtcgaggtgggccagcagctcaccgtg
ggtgccaccaacccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccac
ctggtcggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcac
atcgagatcatcatccggcagatgctgcgccgggtgacgatcatcgagtcgggcgacgcg
gagctgctgcccggcgagctggtcgagcgctcgaagttcgagcaggagaaccgtcgtgtg
gtccaggagggcggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcc
tcgctggcgacggagtcctggctgtcggccgcctccttccaggagacgacccgagtgctg
acggacgcggcgatcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatc
atcggtaagctcatcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgag
ccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgactac
tcgccgttcggcaccggctccggccaggccgttccgctggaggactacgactacggtccg
tacaaccagtaa
DBGET
integrated database retrieval system
