Streptomyces tendae: F3L20_08110
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Entry
F3L20_08110 CDS
T09112
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
stee
Streptomyces tendae
Pathway
stee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F3L20_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stee03021
]
F3L20_08110
Transcription machinery [BR:
stee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F3L20_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
CIS_TMP
Tir_receptor_C
Motif
Other DBs
NCBI-ProteinID:
QER85853
UniProt:
A0ABX5ZN52
LinkDB
All DBs
Position
1734891..1736417
Genome browser
AA seq
508 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTATPRKTTAAAPAAPAADPA
AEEETPAKKAAAKKSTAKKATAKKTTAKKTAAKKTTGKKDDAELVDEEVIEETKAADEPE
GTENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAG
LFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDL
IQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLA
RVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIE
DSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTR
ERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcatcgagcggggaaaggctgaggggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcagagcccaagcgcacccgc
aagagcgtcgcagcgaagagtcccgccaagcgcaccgccaccaagaccgtcgcggccaag
acggcgaccccgcggaagaccaccgccgccgcaccggcggctcccgccgccgaccccgcc
gccgaggaagagacgcccgccaagaaggcggccgccaagaagagcaccgccaagaaggcg
acggccaagaagaccacggcgaagaagaccgccgccaagaagaccacgggcaagaaggac
gacgccgagctggtcgacgaggaggtcatcgaggagaccaaggccgcggacgagcccgag
ggcaccgagaacgccggtttcgtgctctccgacgaggacgaggacgacgctccggcgcag
caggtcgccgccgccggtgccaccgccgacccggtcaaggactacctcaagcagatcggc
aaggtccccctgctcaacgccgagcaggaggtggagctggccaagcgcatcgaggcgggc
ctcttcgccgaggacaagctggcgaactccgacaagctggcgccgaagctcaagcgcgag
ctggagatcatcgcggaggacggccgccgggccaagaaccacctgctggaggccaacctc
cgactggtcgtctccctggccaagcgctacaccggccgcggcatgctcttcctggacctc
atccaggagggcaacctcggtctgatccgcgcggtggagaagttcgactacaccaagggc
tacaagttctccacgtacgccacctggtggatccgtcaggcgatcacccgcgccatggcc
gaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcg
cgcgtgcagcgccagatgctccaggacctgggtcgcgagcccaccccggaggagctggcc
aaggagctcgacatgacccctgagaaggtcatcgaggtccagaagtacggccgcgagccc
atctccctgcacaccccgctgggtgaggacggcgacagcgagttcggtgacctcatcgag
gactccgaggccgtcgtcccggccgacgccgtcagcttcacgctgctgcaggagcagctg
cactccgtgctcgacaccctgtcggagcgcgaggcgggcgtcgtctcgatgcggttcggt
ctcaccgacggtcagccgaagaccctcgacgagatcggcaaggtgtacggcgtcacgcgt
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcggcacccgtcgcgttcg
caggtgctgcgcgactacctcgactag
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