Streptomyces tendae: F3L20_08370
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Entry
F3L20_08370 CDS
T09112
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stee
Streptomyces tendae
Pathway
stee00040
Pentose and glucuronate interconversions
stee01100
Metabolic pathways
stee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F3L20_08370
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F3L20_08370
Enzymes [BR:
stee01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F3L20_08370
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
QER85899
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Position
1796153..1797478
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AA seq
441 aa
AA seq
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MNGRVWHGHARRAGVLAGCTALVLTLTGTAAQARTPAHRDPARQTLPAGDGWASYGTGTT
GGAAAGTAQVRTVTDWAQFTAALAEGGDAPRIIKVKGTVDAVAAGCDALAAPGYDFDAYL
EAYAPETWGLDRDLSDEPDDSPEGLRRSSAARQDVVIKVNVPSNTTIIGVGRNAAIKGAS
LQIKGVDNVIVRNLTLESPVDCFPQWDPTDGDRGNWNSEYDTVVVYGSTHVWLDHNTFTD
GSHPDSAAPVHFGMLYQQHDGELDIVRGANHVTASWNVFTEHDKTILIGNSDSESTAVDD
RGKLKVTFHHNLFSDLTERTPRVRFGQVDVYNNHFKAGSGYGYSFGIGKESQLVAEHNAF
TLPRGISPAKVLKRWNDSPLTARHNLVNGRPVDLIAVHNARIPEETLRSGAGWTPTLRAA
VHPAWAVPALVHLGAGAGRLG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacgtgtatggcatgggcatgccagaagagccggtgtgctggccggctgcacc
gccctcgtgctgaccctgaccggtaccgccgcgcaggcccgcacgcccgcgcaccgcgac
cccgcccgccagaccctgcccgcgggcgacggctgggcctcgtacggcaccggcaccacc
ggaggcgccgccgccggtaccgcgcaggtccgcaccgtgaccgactgggcccagttcacc
gcggccctcgcggagggcggggacgccccgaggatcatcaaggtgaagggcacggtcgac
gccgtcgccgccggctgcgacgcgctcgccgcacccggctacgacttcgacgcctacctg
gaggcgtacgcccccgagacctggggcctggaccgggacctgagcgacgagcccgacgac
agccccgaaggcctgcgccgctcctccgccgcccggcaggacgtggtgatcaaggtgaac
gtcccctccaacaccacgatcatcggcgtcggccggaacgccgcgatcaagggcgccagc
ctgcagatcaagggcgtggacaacgtcatcgtccgcaacctcaccctggagagccccgtc
gactgcttcccgcagtgggaccccaccgacggcgaccggggcaactggaactccgagtac
gacaccgtcgtcgtgtacggctccacccacgtgtggctggaccacaacaccttcaccgac
ggctcgcaccccgacagcgcggccccggtccacttcggcatgctctaccagcagcacgac
ggcgaactggacatcgtgcggggcgcgaaccacgtcaccgcctcctggaacgtcttcacc
gagcacgacaagacgatcctcatcggcaacagcgacagcgagtccaccgccgtggacgac
cgcggcaagctgaaagtgaccttccaccacaacctgttctcggacctcaccgagcggaca
ccgcgcgtgcgcttcggccaggtcgacgtctacaacaaccacttcaaggccggctccggc
tacggctacagcttcggtatcggcaaggagtcccaactcgtcgccgagcacaacgcgttc
accctgccccggggcatcagcccggcgaaggtcctcaagcgctggaacgactcgccgctc
accgcccggcacaacctggtcaacggcaggcccgtcgacctgatcgccgtccacaacgcg
cggatccccgaggagaccctgcgctccggcgcgggctggacgcccaccctgcgcgccgcc
gtgcaccccgcctgggccgtcccggccctggtccacctcggcgcgggcgccggccgcctc
ggctga
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